iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121834

Ensembl Protein ID

EOY30109

UniProt Accession

A0A061GSL3; A0A061GSL3_THECC

Genbank Protein ID

EOY30109.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037432

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037432	EOY30109	EOY30109

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.5	87	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkw............pglknssskefrCPlCr 46
           Ca+Cl+ +k+g  ++ l+ C Hvfh+dC+ +w            ++++  + ++ +CPlCr
   Q: 87   CAVCLSQLKEGdeVRELRnCCHVFHKDCIDRWvdydqdhdqdydHDYNEHEHNHKTCPLCR 147
           ********55444887778*************************888888**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGFFVEDPGL IVTHLLYKTA VVLAVLRWVL SWVLRFRDIS FFTTSSDSQR NPSSSSPLVS 60
LQMIRDSLVL TTFEDAKERV PWVSDTCAVC LSQLKEGDEV RELRNCCHVF HKDCIDRWVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGCTAATT ACTTTCTTTC CTTTTTCCTT CGCCTTTCCT TGTGTTTCAA TGGGTTTCTT 60
TGTAGAGGAT CCAGGGCTAA TTGTAACCCA TCTTCTATAC AAAACAGCTG TTGTTTTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_037432

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002811	Amborella trichopoda	35.11	4.00e-27	113.00
IUUC-Aly-005461	Arabidopsis lyrata	58.47	3.00e-46	176.00
IUUC-Ath-007229	Arabidopsis thaliana	56.83	3.00e-44	170.00
IUUC-Bol-016201	Brassica oleracea	56.22	5.00e-46	175.00
IUUC-Bra-017937	Brassica rapa	55.68	2.00e-47	180.00
IUUC-Gma-043552	Glycine max	45.99	1.00e-38	151.00
IUUC-Mtr-058513	Medicago truncatula	41.27	5.00e-34	135.00
IUUC-Pop-098796	Populus trichocarpa	61.88	5.00e-46	176.00
IUUC-Ppe-101734	Prunus persica	44.83	3.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence