iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079905

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

CM000127

Gene Name

OsI_08453

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA008800	BGIOSGA008800-TA	BGIOSGA008800-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23571674

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.2	109	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++  k+ ++++p C H fh++C+  w       +k+ +CP+Cr
   Q: 109  CSICLGEYneKEILRIMPkCRHNFHLSCIDVW------LQKQTTCPICR 151
           ********54333888999*************......**********8 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MLGSGLNLVT TVIGFGMSAT FIVFVCARLI CGRAARADAE ADAAEGRVAA ARAMAAGPAP 60
FDFDVEFRAT DLDRTIEHTR SGLEPFVVAA IPTMKYSYEA FQSKDDAQCS ICLGEYNEKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGGGT CGGGGCTGAA TCTGGTGACC ACGGTGATCG GCTTCGGGAT GAGTGCCACC 60
TTCATCGTCT TCGTCTGCGC GCGCCTCATC TGCGGCCGCG CCGCGCGGGC CGACGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001181	Aegilops tauschii	84.00	1.00e-60	225.00
IUUC-Atr-002798	Amborella trichopoda	42.86	5.00e-33	134.00
IUUC-Bdi-014570	Brachypodium distachyon	83.11	2.00e-92	331.00
IUUC-Cel-018589	Caenorhabditis elegans	30.83	2.00e-10	57.80
IUUC-Gma-043419	Glycine max	50.32	7.00e-40	155.00
IUUC-Lpe-051361	Leersia perrieri	90.09	8.00e-93	332.00
IUUC-Mtr-057883	Medicago truncatula	51.59	1.00e-41	161.00
IUUC-Mac-064952	Musa acuminata	56.32	5.00e-50	189.00
IUUC-Oba-075171	Oryza barthii	99.55	2.00e-100	357.00
IUUC-Obr-076241	Oryza brachyantha	83.90	7.00e-96	342.00
IUUC-Ogu-078077	Oryza glumaepatula	100.00	3.00e-101	360.00
IUUC-Olo-080910	Oryza longistaminata	95.97	1.00e-69	254.00
IUUC-Ome-081424	Oryza meridionalis	99.55	2.00e-101	361.00
IUUC-Oni-082602	Oryza nivara	100.00	3.00e-101	360.00
IUUC-Opu-083909	Oryza punctata	98.18	1.00e-98	351.00
IUUC-Oru-084703	Oryza rufipogon	96.36	4.00e-99	352.00
IUUC-Osa-085851	Oryza sativa	100.00	3.00e-101	360.00
IUUC-Pop-099783	Populus trichocarpa	46.97	1.00e-46	178.00
IUUC-Ppe-102002	Prunus persica	50.00	2.00e-50	191.00
IUUC-Sit-110325	Setaria italica	77.38	2.00e-89	320.00
IUUC-Sly-110894	Solanum lycopersicum	48.42	2.00e-44	170.00
IUUC-Stu-112119	Solanum tuberosum	44.86	1.00e-42	164.00
IUUC-Tca-120974	Theobroma cacao	52.00	3.00e-51	193.00
IUUC-Tae-123359	Triticum aestivum	80.75	1.00e-87	314.00
IUUC-Tur-126700	Triticum urartu	67.22	2.00e-75	274.00
IUUC-Vvi-131137	Vitis vinifera	55.79	2.00e-51	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence