iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130978

UUCD1 version

UUC-ViV-01018

Ensembl Protein ID

VIT_13s0019g04090.t01

UniProt Accession

A5AE59; A5AE59_VITVI

Genbank Protein ID

CAN75562.1; CBI31480.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM424341; FN595998

Gene Name

VIT_13s0019g04090; VITISV_032578

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0019g04090	VIT_13s0019g04090.t01	VIT_13s0019g04090.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.50e-43	146.9	45	179

Active Site

Position(s)	Description	Evidence
126	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp.egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk 87
           Rl+kel++l+ +    g+sa p++e  +++w  +i+G ++t+Yeg  +kl+++fp dYPfkPP+vkf+t +fhPn+++ G++Cl+il+
   Q: 45   RLQKELMALMMSGGdLGVSAFPESE-SIFTWIGTIMGGNGTVYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNIDQFGNICLDILQ 131
           99****9998776527999999999.6************************************************************9 PP
   S: 88   eeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
             +kWs+a++ ++vllsiqsll epn+espln+ aa+l+++++  y+k+v+
   Q: 132  --DKWSSAYDCKTVLLSIQSLLGEPNIESPLNSYAASLWNNQED-YRKMVH 179
           ..***********************************9987776.**9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEVRPNPVDD NSSIPQQHQH HAHAAPSKQL KAAPNPVDTS SVSQRLQKEL MALMMSGGDL 60
GVSAFPESES IFTWIGTIMG GNGTVYEGLS YKLSLRFPLD YPFKPPQVKF ETMCFHPNID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCGAGAGA GAATAAAAAT AAAGAATAAG CAGAGAGAGA GGAGAAACAG ATAGGAGTTA 60
CAGGATTTGT GAATTTGCTT TTCAAAAACA CTTTATCAAA ACGTTTCCTA CTTTTCGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0000209--P:protein polyubiquitination
GO:0030071--P:regulation of mitotic metaphase/anaphase transition

KEGG

vvi:100253010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002538	Amborella trichopoda	82.52	9.00e-71	258.00
IUUC-Dor-030209	Dipodomys ordii	63.83	1.00e-50	191.00
IUUC-Gma-042702	Glycine max	80.00	1.00e-78	284.00
IUUC-Mtr-058614	Medicago truncatula	73.26	9.00e-68	248.00
IUUC-Mac-064823	Musa acuminata	81.94	3.00e-71	259.00
IUUC-Ppa-095861	Physcomitrella patens	73.42	9.00e-68	248.00
IUUC-Pop-098953	Populus trichocarpa	81.05	9.00e-87	311.00
IUUC-Ppe-101674	Prunus persica	80.63	3.00e-88	316.00
IUUC-Smo-109014	Selaginella moellendorffii	72.67	1.00e-65	241.00
IUUC-Tca-121084	Theobroma cacao	65.35	2.00e-72	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence