iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110981

Ensembl Protein ID

Solyc06g051250.1.1

UniProt Accession

K4C5R8; K4C5R8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g051250.1	Solyc06g051250.1.1	Solyc06g051250.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	35.1	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  f+dg  ++vlp C+H +h dC+ +w       +++ +CPlCr
   Q: 106  CCICLGIFQDGdkLKVLPtCQHSYHSDCVDRW------LRNQSNCPLCR 148
           ********6655599999**************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASSQNSNSF HWQLSEFEGN DFEIRGHTLF FVILIFAIII ITTLFFLYAR WINKFRSPST 60
TDPIGGSGSV HTPPPAPQGL DPIFINDLPI IQYTACSDCS STVIECCICL GIFQDGDKLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTT CGCAAAACTC AAACTCCTTC CATTGGCAGT TATCTGAATT CGAGGGCAAC 60
GATTTTGAAA TCCGCGGCCA TACTCTCTTC TTCGTCATCC TTATTTTCGC CATCATAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	40.13	3.00e-24	103.00
IUUC-Aly-006564	Arabidopsis lyrata	38.56	6.00e-21	92.40
IUUC-Ath-007010	Arabidopsis thaliana	37.50	2.00e-18	84.00
IUUC-Bra-017408	Brassica rapa	32.00	3.00e-14	70.10
IUUC-Gma-043502	Glycine max	46.45	8.00e-31	125.00
IUUC-Mtr-058498	Medicago truncatula	49.36	2.00e-32	130.00
IUUC-Ogu-078773	Oryza glumaepatula	27.85	1.00e-13	68.60
IUUC-Opu-083607	Oryza punctata	29.82	7.00e-19	85.90
IUUC-Pop-099417	Populus trichocarpa	42.86	1.00e-23	100.00
IUUC-Ppe-101813	Prunus persica	43.51	1.00e-23	101.00
IUUC-Stu-112860	Solanum tuberosum	84.52	5.00e-64	235.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence