iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112502

Ensembl Protein ID

PGSC0003DMT400015675

UniProt Accession

M1A6D8; M1A6D8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006123	PGSC0003DMT400015675	PGSC0003DMT400015675

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	57.72	7.00e-33	136.00	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGTNFFINDN EDVLIEILKR LDGRSLGVAA CVCKLWCGIA RNDSLWEHLC FRHVSPPLEG 60
VRTVVLALGG YRRLYMVCVR PVLNRLRKWR PIGMESDSEI VRRVYWTRHE VELSLSLFCV 120

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Nucleotide Sequence
(Fasta)

AAAAAAGTCA AAATCCTTTA CACTCTCGAT TTCTTCTCTA CAAATAGGCA TTACTTCTCT 60
CTTTACTTCC TTATCTCAAC CTTTAACTAA CCATTACATT CCTGAAAATT TGTGTGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

KEGG

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	34.40	2.00e-15	73.90
IUUC-Aly-005539	Arabidopsis lyrata	51.85	5.00e-35	138.00
IUUC-Ath-007127	Arabidopsis thaliana	57.72	2.00e-34	136.00
IUUC-Bdi-014290	Brachypodium distachyon	54.41	1.00e-16	78.20
IUUC-Bol-015233	Brassica oleracea	50.00	3.00e-33	132.00
IUUC-Bra-017984	Brassica rapa	50.62	2.00e-34	137.00
IUUC-Cme-027297	Cyanidioschyzon merolae	37.21	3.00e-04	38.90
IUUC-Gma-043632	Glycine max	61.11	7.00e-46	174.00
IUUC-Lpe-050816	Leersia perrieri	41.76	2.00e-07	47.80
IUUC-Mtr-057946	Medicago truncatula	57.06	4.00e-38	149.00
IUUC-Mlu-068203	Myotis lucifugus	28.75	5.00e-03	34.70
IUUC-Ogl-077474	Oryza glaberrima	47.02	4.00e-09	53.10
IUUC-Ogu-079029	Oryza glumaepatula	47.02	4.00e-09	53.10
IUUC-Oin-080121	Oryza indica	47.02	4.00e-09	53.10
IUUC-Ome-081968	Oryza meridionalis	63.46	6.00e-07	43.90
IUUC-Oni-082552	Oryza nivara	47.02	4.00e-09	53.10
IUUC-Opu-083746	Oryza punctata	47.62	2.00e-09	53.90
IUUC-Oru-084658	Oryza rufipogon	47.02	4.00e-09	53.10
IUUC-Osa-086295	Oryza sativa	47.02	4.00e-09	53.10
IUUC-Olu-087621	Ostreococcus lucimarinus	40.48	1.00e-03	37.70
IUUC-Pop-099566	Populus trichocarpa	65.43	2.00e-39	153.00
IUUC-Ppe-102106	Prunus persica	72.13	2.00e-38	150.00
IUUC-Sly-111364	Solanum lycopersicum	92.81	5.00e-75	271.00
IUUC-Sbi-114231	Sorghum bicolor	65.31	5.00e-07	46.60
IUUC-Tae-124891	Triticum aestivum	60.00	2.00e-16	77.00
IUUC-Tbe-128104	Tupaia belangeri	39.02	9.00e-03	31.60
IUUC-Vvi-130926	Vitis vinifera	57.67	1.00e-38	151.00

Created Date

25-Jun-2017