iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2722__AT3G62250.1	fgenesh2_kg.5__2722__AT3G62250.1	fgenesh2_kg.5__2722__AT3G62250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.20e-41	140.7	1	76
ULD/UDP/UBQ/UBQ_PIM	5.40e-28	97.4	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL AVLQFYKIDG SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATCCCCA TTTTGATCTT TTAGTCCAGC CGTTGCCTCA AAAGATGCAG ATCTTCGTGA 60
AAACCCTAAC GGGGAAGACC ATAACCCTAG AGGTTGAATC GTCCGACACC ATCGACAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005794--C:Golgi apparatus
GO:0003729--F:mRNA binding
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

aly:ARALYDRAFT_486730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dor-030658	Dipodomys ordii	96.10	4.00e-39	152.00
IUUC-Lpe-051472	Leersia perrieri	98.46	6.00e-33	135.00
IUUC-Pop-099335	Populus trichocarpa	96.15	2.00e-71	259.00
IUUC-Ppe-101784	Prunus persica	96.15	2.00e-71	259.00
IUUC-Sly-111035	Solanum lycopersicum	96.15	2.00e-71	261.00
IUUC-Stu-112470	Solanum tuberosum	96.15	2.00e-71	259.00
IUUC-Tca-121126	Theobroma cacao	96.15	2.00e-71	259.00
IUUC-Vvi-131447	Vitis vinifera	95.51	4.00e-71	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence