iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017304

Ensembl Protein ID

Bra008231.1-P

UniProt Accession

M4CVI4; M4CVI4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra008231	Bra008231.1	Bra008231.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.10e-30	106.5	111	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiR+tFni+nDft+eEe++vR+EnqWA
   Q: 111  KNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTAEEEEEVRRENQWA 158
           79*********************************************9 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTKKIVLKS SDGESFEVDE AVALESQTIA HMVEDDCVDN GIPLPNVTSK ILAKVIEYCK 60
KHVDAAASKT EAVDGGASSD DDLKAWDAEF MKIDQATLFE LILAANYLNI KNLLDLTCQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGACGA AGAAGATTGT GTTGAAAAGC TCCGACGGCG AGTCTTTCGA GGTCGACGAG 60
GCCGTGGCTC TCGAGTCTCA GACCATAGCG CACATGGTCG AAGACGACTG CGTCGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009312	Aspergillus nidulans	51.25	1.00e-36	145.00
IUUC-Bol-016431	Brassica oleracea	99.38	2.00e-76	276.00
IUUC-Cja-019785	Callithrix jacchus	56.25	5.00e-37	146.00
IUUC-Cin-025538	Ciona intestinalis	55.97	7.00e-38	149.00
IUUC-Csv-025865	Ciona savignyi	57.86	4.00e-40	156.00
IUUC-Eeu-034817	Erinaceus europaeus	70.73	6.00e-14	68.20
IUUC-Itr-047900	Ictidomys tridecemlineatus	56.25	3.00e-38	150.00
IUUC-Mac-064537	Musa acuminata	80.89	2.00e-57	214.00
IUUC-Ncr-068658	Neurospora crassa	47.26	7.00e-36	142.00
IUUC-Olo-080526	Oryza longistaminata	68.33	9.00e-48	182.00
IUUC-Opu-083354	Oryza punctata	74.10	2.00e-53	201.00
IUUC-Oru-084246	Oryza rufipogon	74.10	7.00e-51	192.00
IUUC-Oar-089762	Ovis aries	46.29	1.00e-33	135.00
IUUC-Pno-094810	Phaeosphaeria nodorum	45.45	9.00e-30	122.00
IUUC-Ppa-095244	Physcomitrella patens	74.38	2.00e-59	221.00
IUUC-Pop-099187	Populus trichocarpa	81.99	1.00e-67	248.00
IUUC-Ppe-101503	Prunus persica	84.28	2.00e-68	250.00
IUUC-Rno-105499	Rattus norvegicus	55.76	3.00e-39	154.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	50.00	3.00e-34	137.00
IUUC-Smo-109307	Selaginella moellendorffii	75.00	1.00e-58	218.00
IUUC-Sit-110435	Setaria italica	68.90	2.00e-54	204.00
IUUC-Sar-112973	Sorex araneus	51.88	6.00e-32	129.00
IUUC-Sbi-114394	Sorghum bicolor	76.40	5.00e-53	199.00
IUUC-Tca-121022	Theobroma cacao	82.39	4.00e-66	243.00
IUUC-Tur-126200	Triticum urartu	75.47	2.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence