iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004120

Ensembl Protein ID

ENSAPLP00000004802.1

UniProt Accession

U3IC30; U3IC30_ANAPL

Genbank Protein ID

ENSAPLP00000004802

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01048745

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000005244.1	ENSAPLT00000005422.1	ENSAPLP00000004802.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-08	33.6	138	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 138  CPICMDGYseivqsGRLIVSTKCGHVFCSQCL------RDSLRNANSCPTCR 183
           ********44444433255688*********9......4559*********8 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MSTTQRKRRG GSVNSRQAQK RSRLIASTTE MASEAEPIEL EESAGEEVVD LTCESSDPVV 60
VDLTHNDSVV IVEENQRRRR NLRLRSQRQS DSCVLSSDDE DETRDNDVYV TDKVSRELGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTTTGGAA GAACATCATT CTAAGATATT GAGAAATCTG GACTTTTTAA CAGTGTACTA 60
CCTCAAGAAG GAATATATAT GTAATATATA TATATATATA AGGAATATAA TATAAGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	42.62	5.00e-12	64.30
IUUC-Aml-002206	Ailuropoda melanoleuca	73.44	3.00e-67	247.00
IUUC-Atr-002771	Amborella trichopoda	36.00	2.00e-11	61.60
IUUC-Aca-004236	Anolis carolinensis	72.82	2.00e-69	254.00
IUUC-Aly-005728	Arabidopsis lyrata	39.34	2.00e-10	58.50
IUUC-Ath-007366	Arabidopsis thaliana	39.34	2.00e-10	58.50
IUUC-Ame-011555	Astyanax mexicanus	54.32	7.00e-41	159.00
IUUC-Bta-012913	Bos taurus	69.39	5.00e-68	249.00
IUUC-Bdi-014655	Brachypodium distachyon	45.90	6.00e-12	63.90
IUUC-Bol-016418	Brassica oleracea	42.62	1.00e-10	59.70
IUUC-Bra-016890	Brassica rapa	38.60	1.00e-08	52.40
IUUC-Cja-019151	Callithrix jacchus	70.56	8.00e-63	232.00
IUUC-Cfa-020868	Canis familiaris	70.77	8.00e-64	235.00
IUUC-Cpo-022249	Cavia porcellus	70.31	5.00e-60	223.00
IUUC-Csa-024125	Chlorocebus sabaeus	69.90	8.00e-64	235.00
IUUC-Cin-025749	Ciona intestinalis	44.26	5.00e-15	73.90
IUUC-Csv-026318	Ciona savignyi	42.62	3.00e-14	71.20
IUUC-Dre-028145	Danio rerio	41.79	1.00e-35	141.00
IUUC-Dno-029605	Dasypus novemcinctus	70.41	2.00e-70	257.00
IUUC-Dor-030898	Dipodomys ordii	69.90	3.00e-66	244.00
IUUC-Dme-032177	Drosophila melanogaster	52.54	1.00e-13	70.10
IUUC-Ete-032694	Echinops telfairi	66.49	4.00e-55	206.00
IUUC-Eca-033443	Equus caballus	72.96	6.00e-67	246.00
IUUC-Eeu-034603	Erinaceus europaeus	70.09	4.00e-41	159.00
IUUC-Fca-035507	Felis catus	72.25	3.00e-63	233.00
IUUC-Fal-037382	Ficedula albicollis	95.41	4.00e-90	323.00
IUUC-Gmo-038960	Gadus morhua	77.55	1.00e-20	91.70
IUUC-Gga-040493	Gallus gallus	89.80	9.00e-94	335.00
IUUC-Gac-042194	Gasterosteus aculeatus	52.63	5.00e-38	149.00
IUUC-Gma-042666	Glycine max	39.34	3.00e-09	54.70
IUUC-Ggo-044726	Gorilla gorilla	70.92	3.00e-64	237.00
IUUC-Hsa-046212	Homo sapiens	70.92	3.00e-64	237.00
IUUC-Hvu-047630	Hordeum vulgare	42.62	9.00e-12	63.50
IUUC-Itr-047892	Ictidomys tridecemlineatus	71.88	6.00e-65	239.00
IUUC-Lpe-050920	Leersia perrieri	40.98	1.00e-11	62.80
IUUC-Loc-051907	Lepisosteus oculatus	51.79	5.00e-36	143.00
IUUC-Laf-054145	Loxodonta africana	70.31	9.00e-63	232.00
IUUC-Mcc-055689	Macaca mulatta	70.41	1.00e-63	235.00
IUUC-Meu-056654	Macropus eugenii	48.69	3.00e-43	167.00
IUUC-Mtr-058314	Medicago truncatula	43.55	1.00e-11	62.00
IUUC-Mga-059303	Meleagris gallopavo	96.94	3.00e-99	353.00
IUUC-Mmr-061355	Microcebus murinus	70.41	8.00e-64	235.00
IUUC-Mdo-062968	Monodelphis domestica	74.61	2.00e-75	274.00
IUUC-Mmu-064421	Mus musculus	69.27	1.00e-70	258.00
IUUC-Mac-064573	Musa acuminata	39.39	8.00e-12	63.90
IUUC-Mpu-066522	Mustela putorius furo	73.44	2.00e-67	247.00
IUUC-Mlu-067065	Myotis lucifugus	70.83	1.00e-64	238.00
IUUC-Nle-069198	Nomascus leucogenys	69.39	3.00e-63	233.00
IUUC-Opr-071141	Ochotona princeps	67.71	1.00e-65	241.00
IUUC-Oan-073341	Ornithorhynchus anatinus	72.67	6.00e-41	159.00
IUUC-Ocu-073787	Oryctolagus cuniculus	70.98	3.00e-72	263.00
IUUC-Oba-075460	Oryza barthii	43.55	2.00e-12	65.50
IUUC-Obr-076349	Oryza brachyantha	40.98	3.00e-11	62.00
IUUC-Ogl-077094	Oryza glaberrima	43.55	2.00e-12	65.50
IUUC-Ogu-078677	Oryza glumaepatula	43.55	2.00e-12	65.50
IUUC-Oin-079992	Oryza indica	43.55	2.00e-12	65.50
IUUC-Olo-080257	Oryza longistaminata	45.16	1.00e-12	65.90
IUUC-Ome-081943	Oryza meridionalis	43.55	2.00e-12	65.90
IUUC-Oni-082671	Oryza nivara	43.55	2.00e-12	65.50
IUUC-Opu-083644	Oryza punctata	43.55	3.00e-12	65.10
IUUC-Oru-084650	Oryza rufipogon	43.55	2.00e-12	65.50
IUUC-Osa-086110	Oryza sativa	43.55	2.00e-12	65.50
IUUC-Ola-086970	Oryzias latipes	44.55	1.00e-35	141.00
IUUC-Olu-087634	Ostreococcus lucimarinus	38.98	5.00e-11	60.10
IUUC-Oga-088242	Otolemur garnettii	71.35	2.00e-71	261.00
IUUC-Oar-089469	Ovis aries	71.35	3.00e-72	263.00
IUUC-Ptr-091254	Pan troglodytes	67.86	3.00e-59	220.00
IUUC-Pan-092919	Papio anubis	70.98	1.00e-64	238.00
IUUC-Psi-093929	Pelodiscus sinensis	88.83	1.00e-86	311.00
IUUC-Pma-094118	Petromyzon marinus	48.31	7.00e-22	94.40
IUUC-Ppa-095718	Physcomitrella patens	34.58	5.00e-13	67.40
IUUC-Pfo-097412	Poecilia formosa	50.91	7.00e-36	142.00
IUUC-Pab-098424	Pongo abelii	70.92	3.00e-64	237.00
IUUC-Pop-099483	Populus trichocarpa	37.10	1.00e-09	56.20
IUUC-Pca-100463	Procavia capensis	63.95	2.00e-34	137.00
IUUC-Ppe-101755	Prunus persica	40.32	2.00e-10	57.40
IUUC-Pva-102594	Pteropus vampyrus	66.67	9.00e-42	162.00
IUUC-Rno-105460	Rattus norvegicus	68.56	1.00e-61	228.00
IUUC-Sha-107487	Sarcophilus harrisii	78.76	2.00e-76	277.00
IUUC-Smo-108908	Selaginella moellendorffii	38.71	2.00e-08	52.40
IUUC-Sit-109959	Setaria italica	37.70	2.00e-05	42.70
IUUC-Stu-112694	Solanum tuberosum	40.62	4.00e-10	57.80
IUUC-Sar-113601	Sorex araneus	71.20	6.00e-64	236.00
IUUC-Sbi-114398	Sorghum bicolor	40.98	4.00e-06	44.70
IUUC-Ssc-115911	Sus scrofa	72.96	7.00e-67	246.00
IUUC-Tgu-117264	Taeniopygia guttata	91.71	1.00e-82	298.00
IUUC-Tru-117663	Takifugu rubripes	53.22	1.00e-39	154.00
IUUC-Tsy-118883	Tarsius syrichta	65.79	1.00e-48	184.00
IUUC-Tae-124035	Triticum aestivum	42.62	4.00e-12	64.70
IUUC-Tur-126408	Triticum urartu	42.62	4.00e-12	64.70
IUUC-Ttr-128950	Tursiops truncatus	87.69	8.00e-34	136.00
IUUC-Vvi-130833	Vitis vinifera	41.94	6.00e-11	60.50
IUUC-Xtr-132879	Xenopus tropicalis	63.92	1.00e-42	164.00
IUUC-Xma-133319	Xiphophorus maculatus	51.32	4.00e-33	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence