iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098878

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTR_0006s11070g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s11070	POPTR_0006s11070.1	POPTR_0006s11070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.80e-56	189.5	77	211
UBD/UBC-like/UBD_UBC	4.50e-74	248.2	77	214

Active Site

Position(s)	Description	Evidence
157	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+
   Q: 77   RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPADSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQ 164
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y+ ++r
   Q: 165  WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYEATAR 211
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp dspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+
   Q: 77   RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSP 167
           899**************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 168  ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYEATARSWT 214
           **********************************************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

SENRSRPSSS TSASALSLGV RRKRNKKKRP GSGKSAVVLD PPLIHFQIVD SSISPFHNPI 60
FSSSGCIGGV IIMASKRILK ELKDLQKDPP TSCSAGPVAE DMFHWQATIM GPADSPYAGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGAAAACA GAAGCAGACC CTCCTCCTCC ACCTCCGCCT CCGCCCTATC TTTGGGTGTA 60
AGAAGAAAAA GAAATAAAAA GAAGAGGCCA GGGAGTGGGA AATCAGCGGT TGTGTTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0006s11070g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007495	Arabidopsis thaliana	94.08	1.00e-84	304.00
IUUC-Bdi-014712	Brachypodium distachyon	95.95	4.00e-84	302.00
IUUC-Bol-016243	Brassica oleracea	97.30	1.00e-84	304.00
IUUC-Bra-016748	Brassica rapa	92.81	3.00e-85	308.00
IUUC-Cre-022765	Chlamydomonas reinhardtii	85.14	1.00e-75	274.00
IUUC-Csv-026311	Ciona savignyi	74.66	5.00e-65	239.00
IUUC-Dno-028952	Dasypus novemcinctus	80.99	1.00e-68	251.00
IUUC-Eeu-034766	Erinaceus europaeus	80.00	1.00e-65	241.00
IUUC-Gma-043068	Glycine max	98.65	3.00e-86	309.00
IUUC-Laf-053580	Loxodonta africana	81.43	3.00e-68	249.00
IUUC-Mtr-058257	Medicago truncatula	98.65	2.00e-86	309.00
IUUC-Mga-059237	Meleagris gallopavo	80.71	1.00e-67	247.00
IUUC-Mac-065211	Musa acuminata	92.55	1.00e-85	308.00
IUUC-Ppa-095177	Physcomitrella patens	98.65	9.00e-86	307.00
IUUC-Ppe-101538	Prunus persica	98.65	3.00e-86	309.00
IUUC-Sly-110885	Solanum lycopersicum	97.97	3.00e-85	306.00
IUUC-Stu-111944	Solanum tuberosum	97.97	3.00e-85	306.00
IUUC-Sar-113302	Sorex araneus	81.29	1.00e-67	247.00
IUUC-Tru-118272	Takifugu rubripes	80.27	1.00e-69	254.00
IUUC-Tni-120056	Tetraodon nigroviridis	80.27	1.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence