iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099106

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_804914; POPTR_0010s05720g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s05720	POPTR_0010s05720.1	POPTR_0010s05720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	32.1	88	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  ++++  l+C+H+fh+ Cl kw     + + +++CPlCr
   Q: 88   CCVCLCGFeaEEEVSELSCKHFFHRGCLDKW-----FDNIHATCPLCR 130
           ********87556999***************.....9**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGLSSFPGAA EGVLPVLVMN TVLSVALLKS MVRSVLQLVV GANWTPPDYE EEPDEYRREN 60
ARERRISITQ FKSLNQNDGG ARNSAMECCV CLCGFEAEEE VSELSCKHFF HRGCLDKWFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGGTGACT AATTTGCTTG CGCAGATATT CCTTGCTCCG TCCTCCTGCC AGAATTTACA 60
AGACGCGTGC TTTTCTTCTG CCTTGGTGGG CTATTGAAAC ATTAGGAGAG AGCTGCATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s05720g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002995	Amborella trichopoda	51.75	7.00e-31	125.00
IUUC-Aly-005603	Arabidopsis lyrata	57.46	5.00e-40	155.00
IUUC-Ath-007251	Arabidopsis thaliana	59.56	2.00e-34	136.00
IUUC-Bol-016497	Brassica oleracea	57.45	2.00e-27	114.00
IUUC-Bra-018002	Brassica rapa	60.14	7.00e-27	112.00
IUUC-Gma-042813	Glycine max	63.16	3.00e-43	166.00
IUUC-Mtr-058286	Medicago truncatula	57.72	2.00e-40	157.00
IUUC-Ppe-101551	Prunus persica	69.72	8.00e-50	188.00
IUUC-Smo-109241	Selaginella moellendorffii	34.85	1.00e-17	81.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence