iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017135

Ensembl Protein ID

Bra035010.1-P

UniProt Accession

M4F1R3; M4F1R3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035010	Bra035010.1	Bra035010.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-06	27.4	106	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +  ++  +++p C+H fh+ C   w       s++  CP+Cr
   Q: 106  CPVCLENIesCQSARLVPgCNHGFHQLCADTW------LSNHTVCPVCR 148
           ******9955333666678*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHYTRISPII LPSPPPTITA TVESSGRGTM LATLFMALLL PCVGMCIVFL IYLFFLWCST 60
RRRIERLRFS EPVKLVTGKG LSVSELEKLP KLTGKELALE VRSTECPVCL ENIESCQSAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACTACA CGCGCATCTC ACCAATTATA TTGCCTTCTC CACCACCCAC CATCACCGCC 60
ACCGTTGAAT CCAGTGGTAG AGGAACCATG TTAGCCACCC TATTCATGGC CCTCCTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006290	Arabidopsis lyrata	80.00	2.00e-67	247.00
IUUC-Ath-006964	Arabidopsis thaliana	79.39	5.00e-69	252.00
IUUC-Bol-015170	Brassica oleracea	94.85	3.00e-73	266.00
IUUC-Gma-042987	Glycine max	58.09	2.00e-39	153.00
IUUC-Mtr-058369	Medicago truncatula	52.94	4.00e-35	139.00
IUUC-Pop-099353	Populus trichocarpa	56.83	3.00e-38	150.00
IUUC-Ppe-101352	Prunus persica	57.14	2.00e-37	147.00
IUUC-Sly-111161	Solanum lycopersicum	49.19	7.00e-29	118.00
IUUC-Stu-112507	Solanum tuberosum	50.36	3.00e-35	140.00
IUUC-Tca-120975	Theobroma cacao	55.88	2.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence