iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+d+  ++++++ p C+H+fh+dC+  w       +++++CPlCr
   Q: 94   CSICLCDYeaREPVRCIPeCNHCFHTDCVDEW------LRTSATCPLCR 136
           ********87777999999*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSPISPPASG VGLGYGIAIA VSILVLISFI MLASYICIRS KSTGRDEATS DVVLDLPSPA 60
AEVKLGLDRP VIESYPRIVL GDSRRLPRPN NGPCSICLCD YEAREPVRCI PECNHCFHTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTACGTCAA ACTTGTCCCC TTCTCCTACA AACTCTCTTC GTCTTCCACA TTTTTAAGTC 60
TCTCTCTAGC TCTCTCTCAC TCACTCTCTC CACATATATG TCTCCTATAA GTCCTCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G07040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003007	Amborella trichopoda	45.73	2.00e-32	130.00
IUUC-Aly-006029	Arabidopsis lyrata	98.11	8.00e-87	311.00
IUUC-Bol-016361	Brassica oleracea	88.05	1.00e-76	277.00
IUUC-Bra-017863	Brassica rapa	89.31	6.00e-70	255.00
IUUC-Dse-031302	Dothistroma septosporum	52.27	8.00e-11	61.60
IUUC-Gma-043023	Glycine max	52.35	6.00e-38	149.00
IUUC-Lpe-051435	Leersia perrieri	46.41	5.00e-31	126.00
IUUC-Mtr-057943	Medicago truncatula	57.06	2.00e-52	197.00
IUUC-Mac-064609	Musa acuminata	47.37	2.00e-33	134.00
IUUC-Oba-075997	Oryza barthii	44.00	8.00e-24	103.00
IUUC-Ogl-077468	Oryza glaberrima	45.75	1.00e-24	107.00
IUUC-Ogu-078269	Oryza glumaepatula	44.00	1.00e-23	104.00
IUUC-Oin-079787	Oryza indica	43.33	3.00e-23	100.00
IUUC-Olo-080986	Oryza longistaminata	44.72	2.00e-18	84.00
IUUC-Ome-081466	Oryza meridionalis	46.41	1.00e-24	108.00
IUUC-Oni-082932	Oryza nivara	46.41	5.00e-25	108.00
IUUC-Opu-083492	Oryza punctata	46.36	2.00e-28	118.00
IUUC-Oru-084454	Oryza rufipogon	43.33	3.00e-23	100.00
IUUC-Osa-086034	Oryza sativa	43.65	1.00e-15	77.00
IUUC-Pop-100049	Populus trichocarpa	52.94	2.00e-37	147.00
IUUC-Ppe-101147	Prunus persica	54.30	4.00e-39	153.00
IUUC-Smo-109669	Selaginella moellendorffii	48.43	5.00e-36	142.00
IUUC-Sly-111274	Solanum lycopersicum	51.68	4.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence