iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121235

Ensembl Protein ID

EOX98955

UniProt Accession

A0A061E1W0; A0A061E1W0_THECC

Genbank Protein ID

EOX98955.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001880

Gene Name

TCM_007616

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_007616	EOX98955	EOX98955

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.7	84	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp...CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f+++ +v +   C Hvfh +C++kw     +   +f+CPlCr
   Q: 84   CSICLVEFEKEDVVSQlrkCRHVFHMNCIEKW-----LDHDQFTCPLCR 127
           ********77755444457*************.....7889*******8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MISLMCSHSR LCTAALIFYT CIWIPFLQLK RALLRLLGFA LPWDRAEESC QVKVCLAVAR 60
FEDLKLSNCS RGRTADNGEV EEVCSICLVE FEKEDVVSQL RKCRHVFHMN CIEKWLDHDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCATGTCA AACTATCATC TTCAGTCACC ACTAGCCTTC CAGATAAAAG AAAGAAAACC 60
CACTGCAGAG TTTGTTTCTT TCATCCTTTT CTCTTTGAAA AAGCTTGTAG GAAAGTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	38.36	6.00e-20	89.00
IUUC-Ath-006708	Arabidopsis thaliana	38.36	6.00e-20	89.00
IUUC-Bol-016104	Brassica oleracea	39.85	4.00e-21	95.10
IUUC-Bra-017196	Brassica rapa	38.97	6.00e-20	91.30
IUUC-Gma-043261	Glycine max	50.78	6.00e-31	125.00
IUUC-Mtr-058301	Medicago truncatula	54.29	2.00e-17	80.50
IUUC-Pop-099029	Populus trichocarpa	44.53	6.00e-22	95.50
IUUC-Ppe-101276	Prunus persica	50.00	5.00e-37	145.00
IUUC-Pgr-103545	Puccinia graminis	31.87	6.00e-10	57.00
IUUC-Sly-111434	Solanum lycopersicum	39.85	1.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence