iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058361

Ensembl Protein ID

KEH19383

UniProt Accession

A0A072TRE5; A0A072TRE5_MEDTR

Genbank Protein ID

KEH19383.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g054430

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g054430	KEH19383	KEH19383

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-13	49.3	169	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           H+dsvtc++     +++++vs+s D+t+k W+l+ g
   Q: 169  HSDSVTCFNSgiciHTCTFVSCSMDCTCKFWSLSNG 204
           *******753477766889*************9776 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MYEIILTSSP EGPMIAFDAS TGATVALFTG SRSPCRGLMV TSQGFIAASH VSSNTGTGSI 60
HIYNWHTPTV FQNIPLPEPV APLAATLDGD FLFAGGVSGS IHSLSLPSGD IIKTCTPYSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATGAGA TAATCCTAAC CAGTTCACCA GAAGGTCCCA TGATAGCATT TGATGCTTCC 60
ACCGGTGCCA CGGTTGCGCT GTTCACTGGT AGCCGGTCAC CATGTCGCGG TCTCATGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_8g054430

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043397	Glycine max	56.28	3.00e-120	424.00
IUUC-Lpe-051359	Leersia perrieri	34.64	8.00e-31	127.00
IUUC-Mac-064646	Musa acuminata	39.42	5.00e-52	197.00
IUUC-Obr-076519	Oryza brachyantha	28.38	2.00e-22	98.60
IUUC-Ogu-078182	Oryza glumaepatula	30.45	2.00e-34	139.00
IUUC-Oin-080068	Oryza indica	31.36	6.00e-39	154.00
IUUC-Oni-082877	Oryza nivara	30.23	1.00e-33	137.00
IUUC-Opu-083553	Oryza punctata	29.47	1.00e-34	140.00
IUUC-Oru-084422	Oryza rufipogon	30.52	1.00e-32	133.00
IUUC-Pop-100084	Populus trichocarpa	53.01	2.00e-71	261.00
IUUC-Ppe-101774	Prunus persica	50.86	2.00e-114	405.00
IUUC-Sit-110647	Setaria italica	36.28	5.00e-26	111.00
IUUC-Tca-120937	Theobroma cacao	49.88	1.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence