iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G31141	GLYMA13G31141.1	GLYMA13G31141.1
GLYMA13G31141	GLYMA13G31141.2	GLYMA13G31141.2
GLYMA13G31141	GLYMA13G31141.3	GLYMA13G31141.3
GLYMA13G31141	GLYMA13G31141.4	GLYMA13G31141.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-22	80.8	438	467
UBD/Beta-Prp	1.20e-39	137.9	395	529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  vt+++f ++ t+++++s D ++++WD
   Q: 438  HSLLVTDVRFrPGsTIFATSSFDRSVRLWD 467
           7788*******888**************** PP

UBD/Beta-Prp

   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtdsvy 184
             +++vls +fs +g++l+s++h + + +w++e+  c+  t + h+ +v+ v++ p + +++++s Dr vrlWd  +  + l +ltg h ++v 
   Q: 395  SSKSKVLSSHFSSDGKVLASAGHEKKVFIWNMENFDCVT-TTETHSLLVTDVRFRPGSTIFATSSFDRSVRLWDAaRPTSSLLKLTG-HAEQVM 486
           44589*********************************9.****************99****************9544456778898.****** PP
   S: 185  slsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
           sl+f++ +   l s++ +  ++lw++ +g c+++ +g +++v+
   Q: 487  SLDFHPRKvDLLCSCDSNDVIRLWNINQGVCMHITKGGSKQVR 529
           ******9966778*********************999988875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MATPPIDRWD ADKILRLYLH DYMIKRGMHN AAEIFKKEAL VPDHPVYSVV DSPDGFLLEW 60
WSIFYEVFNS RQGKDLETGP GSSSKVPMMT HNARNNAPPR IPQISMSEQR TPQFQVNSSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCACTGTC GCTGCTTGCC GCTTAGTTAC TTCACAACAC TCCATCTCTT CTTTTCTCTT 60
CGCAATTCAT CTGTTACAGT TCCCCTTTTT ATTCTCTCTC TCGTTCGATT TCTATATTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00320--WD40

KEGG

gmx:100783354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058662	Medicago truncatula	57.25	1.00e-151	529.00
IUUC-Pop-099223	Populus trichocarpa	62.60	2.00e-135	475.00
IUUC-Ppe-101471	Prunus persica	65.97	3.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence