iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014915

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100824357; BRADI_1g14400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G14400	BRADI1G14400.1	BRADI1G14400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-07	31.7	276	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H ++vt++af  + +l+++++ D +ik+WDlr+
   Q: 276  HHGPVTAVAFdKGgHLMATAGFDRKIKIWDLRK 308
           8899******8445899*************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGISTEEDTK ERKNNKDSLD EMEMKVTKFS RGKAANLGAL RDKKLKGQLA GKERLIGQSA 60
KAAAQAEKWF LPIEGGYLEP EGLEKTYRYQ QQSIVQEVDL LSSRKPFDMI LPVLGPYTLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTATCT CTACCGAAGA GGACACCAAG GAGAGAAAGA ACAACAAAGA CTCTTTGGAT 60
GAAATGGAGA TGAAGGTGAC CAAGTTTTCG CGGGGGAAGG CTGCTAACTT GGGGGTAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

bdi:100824357

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	87.36	0.00e+00	913.00
IUUC-Aly-005663	Arabidopsis lyrata	61.79	5.00e-171	593.00
IUUC-Ath-007405	Arabidopsis thaliana	60.45	2.00e-171	595.00
IUUC-Ame-011572	Astyanax mexicanus	42.79	4.00e-89	321.00
IUUC-Bol-015965	Brassica oleracea	63.96	6.00e-167	579.00
IUUC-Bra-016837	Brassica rapa	64.13	4.00e-161	560.00
IUUC-Dre-028533	Danio rerio	43.61	9.00e-87	313.00
IUUC-Gac-042249	Gasterosteus aculeatus	40.43	4.00e-85	308.00
IUUC-Gma-042693	Glycine max	62.98	0.00e+00	635.00
IUUC-Hvu-047436	Hordeum vulgare	88.03	1.00e-178	618.00
IUUC-Mac-065643	Musa acuminata	72.57	0.00e+00	697.00
IUUC-Ola-086667	Oryzias latipes	41.81	3.00e-91	328.00
IUUC-Ppe-101354	Prunus persica	66.11	1.00e-172	598.00
IUUC-Sit-110158	Setaria italica	83.17	0.00e+00	781.00
IUUC-Tca-121165	Theobroma cacao	63.41	0.00e+00	637.00
IUUC-Tae-125874	Triticum aestivum	87.36	0.00e+00	914.00
IUUC-Tur-126307	Triticum urartu	83.18	0.00e+00	886.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence