iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000870

Ensembl Protein ID

EMT25257

UniProt Accession

M8CDR6; M8CDR6_AEGTA

Genbank Protein ID

EMT25257.1

Protein Name

RING-H2 finger protein ATL4O

Genbank Nucleotide ID

KD515729

Gene Name

F775_04761

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_04761	EMT25257	EMT25257

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-06	28.5	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  f   ++ +++lp C H++h  C+  w         + +CPlCr
   Q: 129  CSVCLGAFllgET-VRLLPvCLHLYHVGCIDPW------LDAHSTCPLCR 171
           9*****9999555.*******************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MPFPHPAAHS PAPPPSHPWP SGGSSKDDSA SQGGIIAGLV IGFVASLLLF TVAWSVFKGH 60
RNSRARARAA AAAAARPWPP PEPYRPRSDE DRHRRSASDP SQTARLPAFT YSPSVKHNVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCATTCC CGCATCCAGC AGCCCACAGC CCAGCGCCAC CGCCGTCGCA TCCATGGCCG 60
TCGGGGGGAT CTTCAAAGGA TGACTCCGCG TCTCAAGGTG GGATCATCGC TGGCCTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_04761

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014489	Brachypodium distachyon	67.48	5.00e-44	169.00
IUUC-Cel-018489	Caenorhabditis elegans	39.53	6.00e-14	71.60
IUUC-Hvu-047398	Hordeum vulgare	58.06	2.00e-37	147.00
IUUC-Lpe-050788	Leersia perrieri	47.50	1.00e-16	79.00
IUUC-Ogl-077496	Oryza glaberrima	69.89	1.00e-27	114.00
IUUC-Ogu-078276	Oryza glumaepatula	67.39	7.00e-27	114.00
IUUC-Oin-080059	Oryza indica	69.89	3.00e-27	114.00
IUUC-Ome-081452	Oryza meridionalis	67.78	2.00e-25	108.00
IUUC-Opu-083516	Oryza punctata	56.58	7.00e-21	94.00
IUUC-Oru-084506	Oryza rufipogon	53.49	6.00e-19	86.30
IUUC-Osa-085670	Oryza sativa	69.89	2.00e-27	114.00
IUUC-Pab-098525	Pongo abelii	37.97	8.00e-12	64.30
IUUC-Ppe-101214	Prunus persica	40.62	6.00e-17	79.70
IUUC-Sit-110654	Setaria italica	72.41	3.00e-32	130.00
IUUC-Sbi-114383	Sorghum bicolor	59.09	1.00e-31	128.00
IUUC-Tae-125928	Triticum aestivum	50.00	7.00e-34	135.00
IUUC-Tur-126708	Triticum urartu	76.19	4.00e-34	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence