iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084717

Ensembl Protein ID

ORUFI04G24770.1

UniProt Accession

A0A0E0PD85; A0A0E0PD85_ORYRU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI04G24770	ORUFI04G24770.1	ORUFI04G24770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-21	75.9	491	562

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++flCp++ ++++ Pv++++G+t++r +I +w+++g + cP+t+q+l++ ++   n +l+rli++w +e+
   Q: 491  IPSDFLCPLTRQIFNRPVTIETGQTFERHAIVQWFDKGIRMCPITGQELESLSIpDINRVLKRLIDNWKSEH 562
           8************************************************999997779**********9987 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MAPPPSSLLR DLLAADGFRN RRKPPDSNPP AAPRTTSMPL QHRRPSRPAR SQSDVLTRSR 60
LRETNNVGTS DGDGVDAGEE QRTATRRSSA SLMSARSYNN NKDSGGGAMR GGSAAAVPAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGCCCGTC ACCATGCAAA CCACAACGAA CAGTGATGTG CCACTAGCAG CAGAGACCTG 60
TCATCCACAC GCCCCCGCCG GCGACAATGG CGCCGCCGCC GTCGTCATTG CTTCGCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	35.70	6.00e-74	272.00
IUUC-Bdi-014999	Brachypodium distachyon	64.04	0.00e+00	1023.00
IUUC-Gma-044073	Glycine max	30.26	3.00e-97	349.00
IUUC-Hvu-047722	Hordeum vulgare	62.26	0.00e+00	656.00
IUUC-Lpe-051567	Leersia perrieri	71.40	0.00e+00	1160.00
IUUC-Mtr-058670	Medicago truncatula	30.78	9.00e-105	374.00
IUUC-Mac-065130	Musa acuminata	38.62	1.00e-70	261.00
IUUC-Oba-075449	Oryza barthii	99.23	0.00e+00	1686.00
IUUC-Obr-076588	Oryza brachyantha	81.38	0.00e+00	1043.00
IUUC-Ogu-078984	Oryza glumaepatula	98.00	0.00e+00	1645.00
IUUC-Olo-080563	Oryza longistaminata	86.01	0.00e+00	1212.00
IUUC-Ome-081747	Oryza meridionalis	93.05	0.00e+00	1578.00
IUUC-Oni-082227	Oryza nivara	99.45	0.00e+00	1682.00
IUUC-Opu-083803	Oryza punctata	84.77	0.00e+00	1429.00
IUUC-Osa-085390	Oryza sativa	99.71	0.00e+00	1316.00
IUUC-Pop-099189	Populus trichocarpa	38.94	3.00e-74	273.00
IUUC-Ppe-101493	Prunus persica	41.77	3.00e-81	296.00
IUUC-Sit-110010	Setaria italica	58.30	0.00e+00	822.00
IUUC-Stu-112239	Solanum tuberosum	37.37	3.00e-71	262.00
IUUC-Sbi-113947	Sorghum bicolor	60.73	0.00e+00	939.00
IUUC-Tca-121435	Theobroma cacao	41.65	4.00e-86	312.00
IUUC-Tae-125513	Triticum aestivum	61.41	0.00e+00	940.00
IUUC-Tur-126526	Triticum urartu	53.45	1.00e-118	420.00
IUUC-Vvi-130964	Vitis vinifera	40.59	1.00e-86	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence