iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099291

Ensembl Protein ID

POPTR_0015s12180.1

UniProt Accession

B9ICD8; B9ICD8_POPTR

Genbank Protein ID

EEF05903.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTR_0015s12180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s12180	POPTR_0015s12180.1	POPTR_0015s12180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-20	73.3	275	313

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd..tllvsGs..dDgtikvWDlrtgvllks 38
            v +la+ +   + l+sG+  +Dg ik+W+++ g++++s
   Q: 275  AVKALAWcPYqfNVLASGGgtGDGCIKIWNITGGTCTHS 313
           58899**9544689***7777**************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNLDQAHCLL TNKIKEVHNP NFGKGYREML RESLTLDSEG RPFRMLVFRG SPKSRRKWNY 60
VIDEMRRDID AEVLSNGIKQ HESRRLPTKE VKVLDAPKIK DDYYVNLMDW GKNNVLAVAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCTTG ATCAAGCCCA CTGTTTGTTG ACAAACAAAA TCAAAGAAGT ACACAATCCC 60
AATTTCGGTG TAAGTCTCCT CCTTTTATGC CAATTGGGAA ATGGGTTTTT TGTGTTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

pop:POPTR_0015s12180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043406	Glycine max	60.46	5.00e-151	526.00
IUUC-Mtr-057975	Medicago truncatula	59.68	1.00e-140	492.00
IUUC-Mac-064491	Musa acuminata	47.72	2.00e-109	388.00
IUUC-Ppe-101170	Prunus persica	60.14	2.00e-152	531.00
IUUC-Sly-111334	Solanum lycopersicum	57.57	2.00e-146	511.00
IUUC-Stu-112271	Solanum tuberosum	55.09	1.00e-142	499.00
IUUC-Tca-120916	Theobroma cacao	62.36	6.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence