iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121847

Ensembl Protein ID

EOY00711

UniProt Accession

A0A061E701; A0A061E701_THECC

Genbank Protein ID

EOY00711.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_010648

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_010648	EOY00711	EOY00711

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-26	91.7	300	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd..tllvsGsdDgtikvWD 29
           H++ v++la++d    l sG+ D +i vW+
   Q: 300  HKSAVNALALNDegSVLFSGACDRSILVWE 329
           9*********5457789************8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKVQSWLATC STSTRDTSTH DSTIPLPRNP SHSPGHLVSD SSSDNRGSAT SSSASSSDTS 60
CSSLQSNLSL QTLPSVPSLQ KLFPETIHFS VSQISVTSIN PRTKHPITCV AVQGNLLYAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTCCTGT CAGCTCCACG TGGCAACGCT TTTTTGCTCT CAAAAGTTTT TTTCTATATT 60
TAATACAGAG GTTATGCTTT GCTTCTCTCT CGAGCCAATC TCCCTTCGTC GATCATCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	52.27	3.00e-98	350.00
IUUC-Aly-006280	Arabidopsis lyrata	68.88	2.00e-138	484.00
IUUC-Ath-006951	Arabidopsis thaliana	69.16	1.00e-137	482.00
IUUC-Bol-015495	Brassica oleracea	68.97	1.00e-126	445.00
IUUC-Bra-017464	Brassica rapa	68.68	6.00e-139	486.00
IUUC-Gma-043162	Glycine max	63.32	8.00e-139	486.00
IUUC-Mtr-057789	Medicago truncatula	62.53	2.00e-140	491.00
IUUC-Mac-065257	Musa acuminata	52.67	4.00e-95	340.00
IUUC-Ogl-077746	Oryza glaberrima	46.25	2.00e-46	179.00
IUUC-Oru-084254	Oryza rufipogon	45.95	6.00e-46	177.00
IUUC-Osa-086021	Oryza sativa	45.95	3.00e-46	178.00
IUUC-Olu-087837	Ostreococcus lucimarinus	29.32	3.00e-27	114.00
IUUC-Pop-100092	Populus trichocarpa	68.62	1.00e-151	528.00
IUUC-Ppe-101598	Prunus persica	70.78	4.00e-135	473.00
IUUC-Smo-108947	Selaginella moellendorffii	43.55	3.00e-52	198.00
IUUC-Sly-111566	Solanum lycopersicum	64.35	7.00e-133	466.00
IUUC-Stu-112893	Solanum tuberosum	62.86	5.00e-130	456.00
IUUC-Sbi-114374	Sorghum bicolor	46.88	3.00e-54	204.00
IUUC-Vvi-130905	Vitis vinifera	67.44	3.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence