iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017394

Ensembl Protein ID

Bra022630.1-P

UniProt Accession

M4E1I0; M4E1I0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022630	Bra022630.1	Bra022630.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.5	326	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlC 45
           C+iCl+++  k+ +++ p C+H+fhadC+  w       + + +CP+C
   Q: 326  CSICLSEYepKEILKTIPpCQHCFHADCIDEW------LKLNGTCPVC 367
           ******9954332444445*************......********** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDFTKTISFS LLFLSLLTPT TVTAACTNAV CRHGDPIIRF PFRLKPHQLN SCGYDKGFDL 60
TCGSDGVNRT TITLPFSGDF TVEMIDYAAQ EIWINDPHNC LPKRILTLNL SATPFAGVYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTTA CAAAAACAAT ATCATTCTCT CTCTTGTTCC TCTCTCTCCT AACCCCCACG 60
ACGGTCACCG CCGCATGCAC TAACGCCGTT TGTCGCCATG GTGATCCGAT TATCCGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005537	Arabidopsis lyrata	80.16	5.00e-58	216.00
IUUC-Ath-006768	Arabidopsis thaliana	83.05	1.00e-166	578.00
IUUC-Bol-016427	Brassica oleracea	97.49	0.00e+00	728.00
IUUC-Gma-043445	Glycine max	47.73	4.00e-85	308.00
IUUC-Mtr-057786	Medicago truncatula	47.73	7.00e-86	310.00
IUUC-Pop-099589	Populus trichocarpa	52.07	3.00e-102	364.00
IUUC-Ppe-101955	Prunus persica	52.05	3.00e-82	298.00
IUUC-Sly-111586	Solanum lycopersicum	51.60	2.00e-91	328.00
IUUC-Stu-112594	Solanum tuberosum	54.97	2.00e-92	332.00
IUUC-Tca-120919	Theobroma cacao	57.06	2.00e-103	368.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence