iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006714

UUCD1 version

UUC-ArT-01442

Ensembl Protein ID

AT1G68180.1

UniProt Accession

Q6NPX0; Q6NPX0_ARATH

Genbank Protein ID

AAR20753.1; AAX22268.1; AAZ14055.1

Protein Name

At1g68180

Genbank Nucleotide ID

BT010696; BT021133; DQ086851

Gene Name

At1g68180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G68180	AT1G68180.1	AT1G68180.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.2	138	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e+f   ++  + l C H++h +C+  w       + + +CP+Cr
   Q: 138  CAICKEEFevgEE-GKELKCLHLYHSSCIVSW------LNIHNTCPICR 179
           ********88544.67799*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTSAYRPRVI VNGTRRTRTF HYFYCRHCSR TIRLRSFGLY GPICPFCSRE INLHDELDIM 60
RPSRPYWDSD TDWITLHLIN EPRSNRFNHD DLVYNTDEEF ADVMPSVQIG PPPASQSAIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTGTCTTG CCTCTTCTTG AAAACATGTA CACGTATTTA ATTATAAATG CATATATAAA 60
GATCCTACCG ACGAAAAAAT AAAAAGATTG AAAACATGAC ATCTGCTTAT CGTCCAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006028	Arabidopsis lyrata	95.18	3.00e-121	426.00
IUUC-Bol-016265	Brassica oleracea	81.14	1.00e-101	361.00
IUUC-Bra-017942	Brassica rapa	78.48	7.00e-89	319.00
IUUC-Gma-042749	Glycine max	32.57	7.00e-39	153.00
IUUC-Mtr-057829	Medicago truncatula	31.80	6.00e-36	143.00
IUUC-Pop-099809	Populus trichocarpa	35.15	5.00e-41	160.00
IUUC-Ppe-101197	Prunus persica	36.86	2.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence