iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099809

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_253439; POPTR_0015s14750g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s14750	POPTR_0015s14750.1	POPTR_0015s14750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	35.1	196	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e f    d ++ lpC+H++h dC+ +w       + + +CP+Cr
   Q: 196  CPVCKEIFevgGD-VMELPCKHLYHSDCIVRW------LNLHNTCPVCR 237
           ********77666.999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLINRPRVT VNGIRRMRTF HYFWCQNCQR TLRLTSLNRL EIFCPHCFRE INHELDVSRP 60
RLIADLSGLE PSPGARLLDS LAQMLDRPTR RQDADFGRRI RWVPGSANGP WITLQFVDPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATTGA TCAATCGCCC TCGTGTTACA GTCAACGGAA TCAGAAGAAT GAGAACTTTT 60
CATTACTTCT GGTGTCAAAA TTGCCAGCGT ACGTTAAGGT TAACCTCCTT AAACCGACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s14750g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006028	Arabidopsis lyrata	36.30	2.00e-36	145.00
IUUC-Ath-006714	Arabidopsis thaliana	35.15	3.00e-36	144.00
IUUC-Ago-007863	Ashbya gossypii	50.00	2.00e-07	50.10
IUUC-Bol-015954	Brassica oleracea	36.88	2.00e-33	136.00
IUUC-Bra-017942	Brassica rapa	39.24	2.00e-32	132.00
IUUC-Gma-042749	Glycine max	44.13	3.00e-65	241.00
IUUC-Ppe-101197	Prunus persica	49.16	4.00e-68	250.00
IUUC-Stu-112577	Solanum tuberosum	42.95	8.00e-59	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence