iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005513

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348717

Gene Name

ATL5; ARALYDRAFT_907844

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_503548.1	scaffold_503548.1	scaffold_503548.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-09	38.3	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  +d+ +vlp CgHvfh dC+  w       + + +CPlCr
   Q: 113  CSVCLSEFeeDDEGRVLPkCGHVFHVDCIDTW------FRSRSSCPLCR 155
           ********88666889999*************......999999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGNMFDSSKT IWGNMNHGSS RYSLNGKIML ASVIILFFAV ILILCFHSYA RWLFRRQNRR 60
IRRRISAHLR SLAAARDPTQ SSSSLSPLDP TVLEKIPIFV YSAKTHESPL EECSVCLSEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCTCTA TCTATCTTCA AAACAATGGG AAACATGTTT GACAGTAGCA AGACGATATG 60
GGGAAACATG AACCATGGAT CGTCACGTTA CTCTCTCAAC GGCAAAATCA TGCTTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_907844

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007291	Arabidopsis thaliana	94.16	1.00e-97	348.00
IUUC-Bol-016026	Brassica oleracea	83.21	2.00e-80	291.00
IUUC-Bra-017804	Brassica rapa	84.77	1.00e-69	256.00
IUUC-Ppe-101661	Prunus persica	49.71	8.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence