iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076623

Ensembl Protein ID

OB04G37280.1

UniProt Accession

J3M2V3; J3M2V3_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G37280	OB04G37280.1	OB04G37280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-31	107.9	9	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           evp++flCpIsl++MrdPv+lp+Gitydr  Ie+wl    + cP+t+q++ ++ d +Pn+tlrrliq+wc+ ++
   Q: 9    EVPSYFLCPISLQIMRDPVTLPTGITYDRDGIERWLLAAST-CPLTKQSVpADCDPTPNHTLRRLIQSWCALHA 81
           69**********************************99998.********778888**************9876 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MEEQQEQVEV PSYFLCPISL QIMRDPVTLP TGITYDRDGI ERWLLAASTC PLTKQSVPAD 60
CDPTPNHTLR RLIQSWCALH ADHGVELVPT PKPPVDRERV AELVSRVQAA TSSAAGLLDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGC AGCAAGAGCA GGTGGAGGTG CCGTCCTACT TCCTGTGCCC CATCTCGCTG 60
CAGATCATGC GCGACCCGGT GACACTCCCC ACCGGCATCA CCTACGACCG CGACGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006194	Arabidopsis lyrata	40.91	4.00e-49	187.00
IUUC-Ath-007471	Arabidopsis thaliana	41.32	1.00e-47	182.00
IUUC-Bol-016472	Brassica oleracea	41.05	2.00e-44	172.00
IUUC-Bra-016841	Brassica rapa	40.08	2.00e-49	188.00
IUUC-Gma-043521	Glycine max	41.34	1.00e-51	196.00
IUUC-Lpe-050796	Leersia perrieri	66.53	1.00e-72	265.00
IUUC-Mtr-058442	Medicago truncatula	36.84	8.00e-49	186.00
IUUC-Oba-075095	Oryza barthii	84.94	4.00e-89	320.00
IUUC-Ogl-077664	Oryza glaberrima	84.98	3.00e-96	344.00
IUUC-Ogu-078137	Oryza glumaepatula	85.41	7.00e-91	326.00
IUUC-Oin-079766	Oryza indica	86.27	7.00e-92	330.00
IUUC-Ome-081839	Oryza meridionalis	86.83	2.00e-120	424.00
IUUC-Oni-082645	Oryza nivara	85.41	7.00e-91	326.00
IUUC-Opu-084067	Oryza punctata	86.19	5.00e-104	370.00
IUUC-Oru-084231	Oryza rufipogon	87.55	9.00e-91	326.00
IUUC-Osa-086055	Oryza sativa	87.55	9.00e-91	326.00
IUUC-Pop-099765	Populus trichocarpa	44.05	3.00e-55	208.00
IUUC-Ppe-102059	Prunus persica	42.15	2.00e-52	198.00
IUUC-Sit-110366	Setaria italica	71.54	1.00e-93	335.00
IUUC-Sly-111579	Solanum lycopersicum	37.41	3.00e-44	171.00
IUUC-Stu-112238	Solanum tuberosum	39.49	3.00e-53	201.00
IUUC-Sbi-114629	Sorghum bicolor	66.94	6.00e-64	236.00
IUUC-Tca-121107	Theobroma cacao	42.29	7.00e-55	206.00
IUUC-Tae-122829	Triticum aestivum	52.87	8.00e-44	170.00
IUUC-Vvi-131173	Vitis vinifera	43.82	8.00e-55	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence