iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017148

Ensembl Protein ID

Bra039281.1-P

UniProt Accession

M4FDW0; M4FDW0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039281	Bra039281.1	Bra039281.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-06	28.4	320	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  k+ +++ p C H+fh +C+ +w       + + +CPlCr
   Q: 320  CPICLSEYasKETVRCIPeCEHCFHIECIDAW------LKLHGSCPLCR 362
           ********98666999999*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTFSNQLFFV LFLIFPLLRA SHPKDCSSSS CGLQDIHARF PFWLEPNQPD FCGHPGFDLH 60
CTNSQNTALN LPKSGTFLVR EIDYRSQHIR LYDPEACLAR KLLTFDVSGS PFSALYLAKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTTTCT CAAACCAACT CTTCTTTGTC CTCTTCCTCA TCTTTCCTCT CTTACGTGCT 60
TCTCACCCAA AAGATTGTTC TTCTTCCTCA TGTGGTCTTC AAGATATCCA TGCCCGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006350	Arabidopsis lyrata	74.79	7.00e-150	523.00
IUUC-Ath-007576	Arabidopsis thaliana	54.75	7.00e-107	380.00
IUUC-Bol-016430	Brassica oleracea	97.19	0.00e+00	691.00
IUUC-Gma-043197	Glycine max	46.86	2.00e-84	305.00
IUUC-Mtr-057646	Medicago truncatula	46.99	4.00e-84	304.00
IUUC-Pop-099388	Populus trichocarpa	47.67	3.00e-93	334.00
IUUC-Ppe-102079	Prunus persica	50.57	1.00e-91	329.00
IUUC-Sly-111740	Solanum lycopersicum	45.87	2.00e-70	259.00
IUUC-Stu-112029	Solanum tuberosum	45.01	1.00e-69	256.00
IUUC-Tca-121363	Theobroma cacao	49.06	4.00e-98	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence