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Tag Content
UUCD2 ID IUUC-Gma-044252
UUCD1 version UUC-GlM-02907
Ensembl Protein ID GLYMA12G30890.2
UniProt Accession K7LVP9; K7LVP9_SOYBN
Genbank Protein ID KRH26615.1
Protein Name Protein HIRA
Genbank Nucleotide ID CM000845
Gene Name LOC100806306; GLYMA_12G183500
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA12G30890 GLYMA12G30890.2 GLYMA12G30890.2
GLYMA12G30890 GLYMA12G30890.1 GLYMA12G30890.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-20 73.5 123 160
UBD/Beta-Prp 2.20e-41 143.6 11 207
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d   l+sGs D+ti+vW+++ g ++
   Q: 123  GHTADVVDLNWsPDdSALASGSLDNTIHVWNMSNGICT 160
           8***********77699**************9998886 PP
   

   UBD/Beta-Prp
   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvw........... 79
           h+  +i ++++ p++  +atg+ d+++++w++++ ++           l++l +h + v++v++ ++g + ++gs+D++i +            
   Q: 11   HEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTdiendassqrlLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHerkpgsgttef 104
           56667788999***********************999**********************************************99988888888 PP
   S: 80   ......dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
                 d+++ k  +tl+gh+++v++l++sp+++ l+sGs d+ti+vw++++g c   +l+gh+++v +v+++p g+ ++s s+D+tv +W+ +
   Q: 105  gsgeppDIENWKVAMTLRGHTADVVDLNWSPDDSALASGSLDNTIHVWNMSNGICTA-VLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTS 197
           888888888************************************************.*********************************998 PP
   S: 168  tgkllrtltg 177
             +l ++  g
   Q: 198  DWSLAHRTDG 207
           7777777665 PP
   
Organism Glycine max
Functional Description
(View)

Functional Description


     Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.
 Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.
Protein Sequence
(Fasta)
MIAEKPSWVR HEGMQIFSID VQPGGLRFAT GGGDHKVRIW NMKSVSTDIE NDASSQRLLA 60
TLRDHFGSVN CVRWAKHGRY VASGSDDQVI LIHERKPGSG TTEFGSGEPP DIENWKVAMT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gma-044252|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGATTAAACT AAATCCAGAA ACAGTATGAA CAACAGCATC ACATCACACA CACGTACATA 60
TTTTGGAAAA ACAATGAAGA AATCTGTGTA TTTGTTTCCG CTGAAACAAT TCTTGTATAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gma-044252|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat
Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF07569--Hira
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0000790--C:nuclear chromatin
GO:0031491--F:nucleosome binding
GO:0003714--F:transcription corepressor activity
GO:0016569--P:covalent chromatin modification
GO:0006336--P:DNA replication-independent nucleosome assembly
GO:0031935--P:regulation of chromatin silencing
GO:0006351--P:transcription, DNA-templated
KEGG gmx:100806306
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001039 Aegilops tauschii 69.28 0.00e+00 1405.00
IUUC-Aml-001723 Ailuropoda melanoleuca 36.20 6.00e-80 292.00
IUUC-Atr-003132 Amborella trichopoda 70.29 0.00e+00 1421.00
IUUC-Aca-004733 Anolis carolinensis 35.18 2.00e-83 304.00
IUUC-Aly-005446 Arabidopsis lyrata 69.59 0.00e+00 1375.00
IUUC-Afl-008591 Aspergillus flavus 33.49 6.00e-67 249.00
IUUC-Ani-009272 Aspergillus nidulans 28.36 3.00e-54 207.00
IUUC-Ang-009655 Aspergillus niger 31.68 3.00e-68 253.00
IUUC-Aor-010119 Aspergillus oryzae 33.49 6.00e-67 249.00
IUUC-Bta-013320 Bos taurus 36.38 1.00e-81 298.00
IUUC-Bci-013795 Botrytis cinerea 31.66 1.00e-68 255.00
IUUC-Bdi-014075 Brachypodium distachyon 72.33 0.00e+00 1451.00
IUUC-Bol-016440 Brassica oleracea 70.79 0.00e+00 1383.00
IUUC-Bra-016651 Brassica rapa 70.72 0.00e+00 1338.00
IUUC-Cel-018692 Caenorhabditis elegans 27.23 1.00e-42 168.00
IUUC-Cja-018987 Callithrix jacchus 35.11 8.00e-73 268.00
IUUC-Cfa-020132 Canis familiaris 35.98 4.00e-80 293.00
IUUC-Cpo-021484 Cavia porcellus 36.62 2.00e-84 307.00
IUUC-Cre-022846 Chlamydomonas reinhardtii 37.60 4.00e-74 273.00
IUUC-Csa-023081 Chlorocebus sabaeus 36.62 2.00e-85 311.00
IUUC-Cin-025182 Ciona intestinalis 36.17 3.00e-82 300.00
IUUC-Csv-026154 Ciona savignyi 35.62 5.00e-83 302.00
IUUC-Cgl-026655 Colletotrichum gloeosporioides 32.01 2.00e-64 241.00
IUUC-Dre-027655 Danio rerio 35.07 2.00e-81 297.00
IUUC-Dno-029557 Dasypus novemcinctus 35.88 4.00e-68 253.00
IUUC-Dor-030687 Dipodomys ordii 36.59 4.00e-63 236.00
IUUC-Dse-031334 Dothistroma septosporum 33.14 5.00e-70 259.00
IUUC-Dme-031746 Drosophila melanogaster 36.58 2.00e-86 313.00
IUUC-Ete-032384 Echinops telfairi 32.10 2.00e-60 228.00
IUUC-Eca-033430 Equus caballus 35.94 6.00e-81 295.00
IUUC-Fca-036121 Felis catus 36.16 3.00e-81 296.00
IUUC-Fox-037906 Fusarium oxysporum 31.79 3.00e-68 252.00
IUUC-Fso-038409 Fusarium solani 26.75 5.00e-86 312.00
IUUC-Gmo-039151 Gadus morhua 39.01 4.00e-80 293.00
IUUC-Gga-040936 Gallus gallus 35.47 4.00e-84 306.00
IUUC-Gac-041405 Gasterosteus aculeatus 39.63 6.00e-78 285.00
IUUC-Ggo-045430 Gorilla gorilla 36.62 1.00e-85 311.00
IUUC-Hsa-046442 Homo sapiens 36.62 1.00e-85 311.00
IUUC-Hvu-047587 Hordeum vulgare 72.41 0.00e+00 1345.00
IUUC-Itr-048910 Ictidomys tridecemlineatus 40.51 1.00e-61 229.00
IUUC-Kpa-049145 Komagataella pastoris 31.72 2.00e-56 214.00
IUUC-Lch-050474 Latimeria chalumnae 35.32 2.00e-78 287.00
IUUC-Lpe-051209 Leersia perrieri 70.31 0.00e+00 1386.00
IUUC-Loc-052119 Lepisosteus oculatus 35.12 2.00e-78 287.00
IUUC-Laf-053718 Loxodonta africana 37.00 3.00e-84 306.00
IUUC-Mcc-055621 Macaca mulatta 34.66 7.00e-72 265.00
IUUC-Meu-055914 Macropus eugenii 38.28 1.00e-52 202.00
IUUC-Mor-057090 Magnaporthe oryzae 34.27 1.00e-66 248.00
IUUC-Mpo-057364 Magnaporthe poae 32.72 8.00e-69 255.00
IUUC-Mtr-057744 Medicago truncatula 81.75 0.00e+00 1708.00
IUUC-Mla-058914 Melampsora laricipopulina 37.10 1.00e-64 241.00
IUUC-Mga-060181 Meleagris gallopavo 35.04 1.00e-79 291.00
IUUC-Mvi-060432 Microbotryum violaceum 33.25 6.00e-57 216.00
IUUC-Mmr-060871 Microcebus murinus 36.82 5.00e-86 312.00
IUUC-Mdo-062301 Monodelphis domestica 36.62 2.00e-83 303.00
IUUC-Mmu-063888 Mus musculus 36.82 1.00e-86 314.00
IUUC-Mac-064768 Musa acuminata 72.06 0.00e+00 1390.00
IUUC-Mpu-066732 Mustela putorius furo 36.20 5.00e-80 292.00
IUUC-Mlu-067542 Myotis lucifugus 36.25 2.00e-82 300.00
IUUC-Ncr-068842 Neurospora crassa 33.01 2.00e-70 261.00
IUUC-Nle-070156 Nomascus leucogenys 36.98 7.00e-86 312.00
IUUC-Opr-070808 Ochotona princeps 39.54 1.00e-51 198.00
IUUC-Ont-072105 Oreochromis niloticus 35.34 2.00e-79 291.00
IUUC-Ocu-074962 Oryctolagus cuniculus 36.57 1.00e-81 298.00
IUUC-Oba-075178 Oryza barthii 72.39 0.00e+00 1391.00
IUUC-Obr-076399 Oryza brachyantha 71.21 0.00e+00 1401.00
IUUC-Ogu-078797 Oryza glumaepatula 72.39 0.00e+00 1391.00
IUUC-Oin-080085 Oryza indica 71.92 0.00e+00 1312.00
IUUC-Olo-081048 Oryza longistaminata 87.62 3.00e-171 596.00
IUUC-Ome-081324 Oryza meridionalis 72.49 0.00e+00 1393.00
IUUC-Oni-082548 Oryza nivara 72.18 0.00e+00 1390.00
IUUC-Opu-084008 Oryza punctata 79.79 0.00e+00 778.00
IUUC-Oru-084339 Oryza rufipogon 72.39 0.00e+00 1392.00
IUUC-Osa-085782 Oryza sativa 72.39 0.00e+00 1392.00
IUUC-Ola-087302 Oryzias latipes 34.26 8.00e-77 282.00
IUUC-Olu-087611 Ostreococcus lucimarinus 41.55 4.00e-115 409.00
IUUC-Oga-087935 Otolemur garnettii 35.77 9.00e-81 295.00
IUUC-Oar-089229 Ovis aries 32.80 6.00e-64 239.00
IUUC-Ptr-090715 Pan troglodytes 36.62 1.00e-85 311.00
IUUC-Pan-092318 Papio anubis 35.98 2.00e-81 297.00
IUUC-Psi-094053 Pelodiscus sinensis 35.27 3.00e-80 293.00
IUUC-Ppa-095499 Physcomitrella patens 50.94 0.00e+00 944.00
IUUC-Pfo-096857 Poecilia formosa 34.74 1.00e-75 278.00
IUUC-Pab-098047 Pongo abelii 36.62 1.00e-85 311.00
IUUC-Ppe-101261 Prunus persica 80.59 0.00e+00 1582.00
IUUC-Pva-102683 Pteropus vampyrus 36.58 8.00e-83 301.00
IUUC-Pgr-103660 Puccinia graminis 36.22 2.00e-61 230.00
IUUC-Ptt-103900 Puccinia triticina 35.68 6.00e-61 228.00
IUUC-Pte-104209 Pyrenophora teres 33.88 5.00e-69 256.00
IUUC-Pyt-104802 Pyrenophora triticirepentis 33.88 2.00e-68 254.00
IUUC-Rno-105566 Rattus norvegicus 36.82 2.00e-86 313.00
IUUC-Sce-106291 Saccharomyces cerevisiae 31.14 6.00e-65 242.00
IUUC-Sha-107514 Sarcophilus harrisii 33.73 9.00e-68 251.00
IUUC-Sja-107833 Schizosaccharomyces japonicus 32.75 8.00e-70 258.00
IUUC-Spo-108162 Schizosaccharomyces pombe 36.24 1.00e-71 265.00
IUUC-Smo-109186 Selaginella moellendorffii 51.28 0.00e+00 919.00
IUUC-Sit-110730 Setaria italica 68.54 0.00e+00 1399.00
IUUC-Sly-111547 Solanum lycopersicum 72.01 0.00e+00 1471.00
IUUC-Stu-112705 Solanum tuberosum 72.10 0.00e+00 1466.00
IUUC-Sar-113222 Sorex araneus 35.23 2.00e-74 273.00
IUUC-Sbi-114272 Sorghum bicolor 72.47 0.00e+00 1391.00
IUUC-Sre-115061 Sporisorium reilianum 37.28 7.00e-71 262.00
IUUC-Ssc-116364 Sus scrofa 35.74 7.00e-81 295.00
IUUC-Tru-117590 Takifugu rubripes 35.54 4.00e-84 306.00
IUUC-Tsy-119212 Tarsius syrichta 40.48 3.00e-68 253.00
IUUC-Tni-119915 Tetraodon nigroviridis 34.60 7.00e-82 298.00
IUUC-Tca-121765 Theobroma cacao 77.76 0.00e+00 1643.00
IUUC-Tre-121887 Trichoderma reesei 34.67 9.00e-61 228.00
IUUC-Tvi-122262 Trichoderma virens 34.91 9.00e-61 228.00
IUUC-Tae-123009 Triticum aestivum 62.45 0.00e+00 874.00
IUUC-Tur-126483 Triticum urartu 68.98 0.00e+00 1425.00
IUUC-Tbe-127350 Tupaia belangeri 32.53 9.00e-47 182.00
IUUC-Ttr-129077 Tursiops truncatus 32.30 1.00e-69 258.00
IUUC-Uma-129465 Ustilago maydis 37.44 5.00e-73 269.00
IUUC-Vvi-131397 Vitis vinifera 77.33 0.00e+00 1626.00
IUUC-Xtr-132057 Xenopus tropicalis 35.71 1.00e-83 305.00
IUUC-Xma-134139 Xiphophorus maculatus 32.31 5.00e-64 239.00
Created Date 25-Jun-2017

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