iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117797

UUCD1 version

UUC-TaR-00078

Ensembl Protein ID

ENSTRUP00000003453.1

UniProt Accession

H2RTI6; H2RTI6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

sec13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000001500.1	ENSTRUT00000003472.1	ENSTRUP00000003453.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-28	97.1	55	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ vW 
   Q: 55   GHEGPVWQVAWahPMfgNILASCSYDRKVIVWK 87
           8***********9666699*************7 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

QVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRTVKIF DVRNGGQILV ADLRGHEGPV 60
WQVAWAHPMF GNILASCSYD RKVIVWKEEN GSWDKMYEYT GHESSVNSVC WGPYDFGLIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTTTCCG TTATCAACAC GGTGGACACC TCTCACGAAG ATATGATCGT AAGTTGTTTT 60
CTCCTTTTAA AGCAGGCTGA AGTTCGTGCC AGCATCCAGC ACAGAGGTGT TTCATTCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0051216--P:cartilage development
GO:0055123--P:digestive system development
GO:0007029--P:endoplasmic reticulum organization
GO:0070278--P:extracellular matrix constituent secretion
GO:0042462--P:eye photoreceptor cell development
GO:0001889--P:liver development
GO:0036372--P:opsin transport
GO:0010842--P:retina layer formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	51.99	2.00e-90	325.00
IUUC-Aml-001832	Ailuropoda melanoleuca	86.92	6.00e-169	586.00
IUUC-Atr-002914	Amborella trichopoda	55.03	6.00e-93	333.00
IUUC-Apl-003992	Anas platyrhynchos	87.50	8.00e-164	569.00
IUUC-Aca-005283	Anolis carolinensis	88.40	1.00e-173	602.00
IUUC-Aly-005654	Arabidopsis lyrata	54.85	5.00e-91	327.00
IUUC-Ath-006816	Arabidopsis thaliana	54.85	2.00e-90	325.00
IUUC-Ago-007827	Ashbya gossypii	50.00	6.00e-83	300.00
IUUC-Acl-008205	Aspergillus clavatus	52.16	6.00e-83	300.00
IUUC-Afl-008748	Aspergillus flavus	51.14	2.00e-84	305.00
IUUC-Afu-008791	Aspergillus fumigatus	51.16	7.00e-82	296.00
IUUC-Ani-009152	Aspergillus nidulans	50.81	3.00e-85	308.00
IUUC-Ang-009765	Aspergillus niger	51.14	2.00e-85	308.00
IUUC-Aor-009927	Aspergillus oryzae	51.00	3.00e-81	295.00
IUUC-Ate-010248	Aspergillus terreus	51.47	3.00e-85	308.00
IUUC-Ame-011478	Astyanax mexicanus	91.22	4.00e-177	613.00
IUUC-Bgr-012276	Blumeria graminis	50.34	1.00e-80	293.00
IUUC-Bta-012700	Bos taurus	86.92	3.00e-168	583.00
IUUC-Bci-013722	Botrytis cinerea	49.67	9.00e-83	299.00
IUUC-Bdi-014818	Brachypodium distachyon	52.65	1.00e-90	326.00
IUUC-Bol-015779	Brassica oleracea	55.56	9.00e-91	326.00
IUUC-Bra-016973	Brassica rapa	55.41	7.00e-92	331.00
IUUC-Cel-018479	Caenorhabditis elegans	40.58	1.00e-67	249.00
IUUC-Cja-019956	Callithrix jacchus	87.80	6.00e-154	536.00
IUUC-Cfa-020752	Canis familiaris	87.54	3.00e-170	590.00
IUUC-Cpo-021871	Cavia porcellus	86.29	5.00e-168	583.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	55.15	2.00e-96	345.00
IUUC-Csa-023393	Chlorocebus sabaeus	87.23	6.00e-170	589.00
IUUC-Cho-024786	Choloepus hoffmanni	67.60	2.00e-119	422.00
IUUC-Cin-025332	Ciona intestinalis	68.95	3.00e-132	464.00
IUUC-Csv-025926	Ciona savignyi	66.99	5.00e-128	450.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.19	7.00e-80	290.00
IUUC-Cne-027054	Cryptococcus neoformans	48.94	1.00e-78	286.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.88	5.00e-49	189.00
IUUC-Dre-027782	Danio rerio	93.73	0.00e+00	625.00
IUUC-Dno-029628	Dasypus novemcinctus	86.34	2.00e-169	588.00
IUUC-Dor-030650	Dipodomys ordii	70.62	1.00e-129	456.00
IUUC-Dse-031206	Dothistroma septosporum	49.18	5.00e-81	293.00
IUUC-Dme-031854	Drosophila melanogaster	59.27	1.00e-103	369.00
IUUC-Ete-032618	Echinops telfairi	60.25	2.00e-106	378.00
IUUC-Eca-033268	Equus caballus	87.54	5.00e-170	589.00
IUUC-Fca-035918	Felis catus	86.92	5.00e-169	586.00
IUUC-Fal-037551	Ficedula albicollis	86.93	1.00e-152	532.00
IUUC-Fox-037763	Fusarium oxysporum	49.34	2.00e-82	298.00
IUUC-Fso-038341	Fusarium solani	49.18	2.00e-81	295.00
IUUC-Gmo-038638	Gadus morhua	96.56	0.00e+00	640.00
IUUC-Ggr-039865	Gaeumannomyces graminis	49.16	3.00e-80	291.00
IUUC-Gga-040193	Gallus gallus	87.46	4.00e-171	593.00
IUUC-Gma-044311	Glycine max	55.37	2.00e-92	332.00
IUUC-Ggo-045252	Gorilla gorilla	86.92	4.00e-169	587.00
IUUC-Hsa-046565	Homo sapiens	86.60	8.00e-169	586.00
IUUC-Hvu-047835	Hordeum vulgare	53.31	3.00e-92	331.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	86.60	3.00e-168	583.00
IUUC-Kpa-049148	Komagataella pastoris	51.99	5.00e-85	307.00
IUUC-Lch-050421	Latimeria chalumnae	90.28	3.00e-175	607.00
IUUC-Lpe-051187	Leersia perrieri	51.32	2.00e-91	331.00
IUUC-Loc-052167	Lepisosteus oculatus	91.90	3.00e-177	613.00
IUUC-Lma-053250	Leptosphaeria maculans	51.01	5.00e-81	293.00
IUUC-Laf-054304	Loxodonta africana	86.60	4.00e-168	583.00
IUUC-Mcc-055519	Macaca mulatta	86.92	2.00e-169	587.00
IUUC-Meu-056439	Macropus eugenii	87.19	2.00e-171	594.00
IUUC-Mor-057241	Magnaporthe oryzae	50.68	1.00e-80	293.00
IUUC-Mpo-057373	Magnaporthe poae	45.24	4.00e-66	244.00
IUUC-Mtr-058412	Medicago truncatula	54.36	2.00e-90	325.00
IUUC-Mla-058966	Melampsora laricipopulina	49.24	1.00e-86	313.00
IUUC-Mga-060066	Meleagris gallopavo	87.50	8.00e-164	569.00
IUUC-Mvi-060290	Microbotryum violaceum	47.13	9.00e-80	293.00
IUUC-Mmr-060717	Microcebus murinus	86.92	6.00e-169	586.00
IUUC-Mdo-062496	Monodelphis domestica	87.81	4.00e-172	597.00
IUUC-Mmu-063490	Mus musculus	86.60	5.00e-169	586.00
IUUC-Mac-065307	Musa acuminata	54.79	4.00e-89	321.00
IUUC-Mpu-066601	Mustela putorius furo	87.54	3.00e-170	590.00
IUUC-Mlu-067501	Myotis lucifugus	87.54	5.00e-170	590.00
IUUC-Nfi-068360	Neosartorya fischeri	49.62	4.00e-67	247.00
IUUC-Ncr-068928	Neurospora crassa	49.33	1.00e-83	303.00
IUUC-Nle-069028	Nomascus leucogenys	86.60	5.00e-169	586.00
IUUC-Opr-070446	Ochotona princeps	86.27	2.00e-160	558.00
IUUC-Ont-071587	Oreochromis niloticus	96.88	0.00e+00	642.00
IUUC-Oan-073211	Ornithorhynchus anatinus	85.94	4.00e-169	587.00
IUUC-Ocu-074306	Oryctolagus cuniculus	85.05	1.00e-164	572.00
IUUC-Oba-075069	Oryza barthii	52.65	4.00e-91	327.00
IUUC-Obr-076667	Oryza brachyantha	52.98	6.00e-92	330.00
IUUC-Ogl-077208	Oryza glaberrima	52.65	4.00e-91	327.00
IUUC-Ogu-078513	Oryza glumaepatula	52.65	4.00e-91	327.00
IUUC-Oin-079094	Oryza indica	52.65	4.00e-91	327.00
IUUC-Olo-080473	Oryza longistaminata	52.65	4.00e-91	327.00
IUUC-Ome-081643	Oryza meridionalis	52.65	4.00e-91	327.00
IUUC-Oni-082589	Oryza nivara	52.65	4.00e-91	327.00
IUUC-Opu-083677	Oryza punctata	52.65	3.00e-91	327.00
IUUC-Oru-084537	Oryza rufipogon	52.65	4.00e-91	327.00
IUUC-Osa-085449	Oryza sativa	52.65	4.00e-91	327.00
IUUC-Ola-087226	Oryzias latipes	97.18	0.00e+00	642.00
IUUC-Olu-087893	Ostreococcus lucimarinus	52.40	8.00e-80	290.00
IUUC-Oga-088837	Otolemur garnettii	86.92	9.00e-170	589.00
IUUC-Oar-089594	Ovis aries	87.23	3.00e-169	587.00
IUUC-Ptr-091132	Pan troglodytes	86.60	1.00e-168	585.00
IUUC-Psi-093568	Pelodiscus sinensis	88.24	2.00e-165	574.00
IUUC-Pma-094172	Petromyzon marinus	74.36	2.00e-66	244.00
IUUC-Pno-094955	Phaeosphaeria nodorum	49.67	6.00e-80	290.00
IUUC-Ppa-095578	Physcomitrella patens	55.63	6.00e-92	330.00
IUUC-Pfo-096063	Poecilia formosa	96.87	0.00e+00	640.00
IUUC-Pab-098674	Pongo abelii	86.92	7.00e-169	586.00
IUUC-Pop-099402	Populus trichocarpa	53.69	3.00e-91	328.00
IUUC-Pca-100824	Procavia capensis	68.85	5.00e-127	447.00
IUUC-Ppe-101707	Prunus persica	54.36	1.00e-89	323.00
IUUC-Pva-103161	Pteropus vampyrus	82.55	3.00e-160	557.00
IUUC-Pgr-103573	Puccinia graminis	52.94	1.00e-87	316.00
IUUC-Ptt-103700	Puccinia triticina	50.78	3.00e-80	291.00
IUUC-Pte-104267	Pyrenophora teres	49.66	3.00e-78	285.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	47.62	4.00e-71	261.00
IUUC-Rno-104833	Rattus norvegicus	86.92	2.00e-169	587.00
IUUC-Sce-106437	Saccharomyces cerevisiae	49.83	8.00e-75	273.00
IUUC-Sha-106611	Sarcophilus harrisii	87.19	2.00e-171	594.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	49.34	4.00e-81	294.00
IUUC-Spo-108362	Schizosaccharomyces pombe	51.16	1.00e-85	309.00
IUUC-Smo-109674	Selaginella moellendorffii	54.64	3.00e-94	338.00
IUUC-Sit-110132	Setaria italica	52.98	3.00e-92	331.00
IUUC-Sly-111852	Solanum lycopersicum	52.49	3.00e-87	315.00
IUUC-Stu-112195	Solanum tuberosum	52.82	9.00e-88	316.00
IUUC-Sbi-114229	Sorghum bicolor	52.82	3.00e-92	331.00
IUUC-Sre-114898	Sporisorium reilianum	49.43	4.00e-91	328.00
IUUC-Ssc-115995	Sus scrofa	87.42	4.00e-79	286.00
IUUC-Tgu-116793	Taeniopygia guttata	87.81	8.00e-161	559.00
IUUC-Tsy-118967	Tarsius syrichta	96.30	7.00e-26	111.00
IUUC-Tni-120366	Tetraodon nigroviridis	97.20	0.00e+00	641.00
IUUC-Tca-121068	Theobroma cacao	54.11	6.00e-90	323.00
IUUC-Tre-121899	Trichoderma reesei	48.68	7.00e-82	296.00
IUUC-Tvi-122380	Trichoderma virens	49.17	2.00e-82	298.00
IUUC-Tae-123998	Triticum aestivum	53.97	3.00e-93	334.00
IUUC-Tur-126202	Triticum urartu	53.31	2.00e-92	331.00
IUUC-Tme-127181	Tuber melanosporum	52.92	2.00e-89	322.00
IUUC-Ttr-128448	Tursiops truncatus	75.08	8.00e-141	493.00
IUUC-Uma-129661	Ustilago maydis	49.71	6.00e-92	330.00
IUUC-Vda-129666	Verticillium dahliae	51.88	2.00e-80	291.00
IUUC-Vpa-130318	Vicugna pacos	87.54	8.00e-170	589.00
IUUC-Vvi-130868	Vitis vinifera	53.69	1.00e-90	326.00
IUUC-Xtr-131859	Xenopus tropicalis	86.52	7.00e-169	585.00
IUUC-Xma-133898	Xiphophorus maculatus	97.18	0.00e+00	643.00
IUUC-Yli-134559	Yarrowia lipolytica	51.70	5.00e-82	297.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence