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Tag Content
iUUCD ID IUUC-Ame-011605
Ensembl Protein ID ENSAMXP00000022256.1
UniProt Accession W5LQF9; W5LQF9_ASTMX
Genbank Protein ID ENSAMXP00000022256
Protein Name Uncharacterized protein
Genbank Nucleotide ID APWO01007803
Gene Name STRN (1 of many)
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMXG00000021609.1 ENSAMXT00000022256.1 ENSAMXP00000022256.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-28 97.9 701 738
UBD/Beta-Prp 2.60e-48 165.0 560 773
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H d vt+la ++ +l sGs+D++i++W+l ++++
   Q: 701 HLDAVTSLAVdPNgLYLMSGSHDCSIRLWNLENKTCIQ 738
    99*********77799**************99888876 PP
   


   UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls...lsfspsg.dklvsGshdrtirvwdletgqcl 129
    l gh+++v+ + s+ + l+++s D+t+++w+ s+++ ++ ++++++ + +++ s+ ++v+ + i ++++et+q +
   Q: 560 RGALCGHTDAVWGLVHSSAHQRLLSCSADGTVRLWNASNPQAALAVFNENKDLGLpssVDLVCSDpAYMVTSFNNGRIGLFNMETRQQV 648
    45679******************************************9999998744455555666*********************** PP
   S: 130 ee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec 214
    + ++sg + +n v +hp+ + +++ Dr ++++d +tgkl++ + h d+v+sl++d+ng +l+sgs+d +++lw+l++++c
   Q: 649 LNmestVESGASCQINKVLSHPTLPITITAQEDRHIKFYDNNTGKLIHSMVA-HLDAVTSLAVDPNGLYLMSGSHDCSIRLWNLENKTC 736
    999999****************99**************************98.************************************ PP
   S: 215 vrtlnght....dnvksvrfspnderlvsgssDgsir 247
    ++++++h+ + + +v+f+p + +++s+++D +
   Q: 737 IQEFTAHRkkfdESIHDVAFHPSKCYIASAGADSLAK 773
    ********999999******************98766 PP
   

Organism Astyanax mexicanus
Protein Sequence
(Fasta)
MDEHAGPGVF FNNNNSSSSS SPLLQAGGRG AAADSDGGEA GRAQYSIPGI LHFLQHEWAR 60
FEVERAQWEV ERAELQAQVA FLHGERKGQE NLKKDLVRRI KMLEYALKQE RAKYHKLKYG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ame-011605|E3,WD_repeat;UBD,Beta-Prp|Astyanax mexicanus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAGTGGGCGG AGCGGATCGT CGGCTGAGCG GCGCTGCTCT CAGAGGCTCG GCCGGCCTGT 60
AGTGAGCGGA TCCTCCGGCT GAGAGACTCA GAGAGAGAGG CGGAGAGAGA GAGGGAGATA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ame-011605|E3,WD_repeat;UBD,Beta-Prp|Astyanax mexicanus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Afl-008585 Aspergillus flavus 26.50 3.00e-34 140.00
IUUC-Afu-009096 Aspergillus fumigatus 22.95 6.00e-30 126.00
IUUC-Aor-009982 Aspergillus oryzae 26.50 4.00e-34 140.00
IUUC-Ate-010457 Aspergillus terreus 25.61 4.00e-30 126.00
IUUC-Bgr-012143 Blumeria graminis 25.00 2.00e-35 144.00
IUUC-Cin-025167 Ciona intestinalis 47.04 7.00e-176 610.00
IUUC-Csv-026143 Ciona savignyi 49.08 0.00e+00 633.00
IUUC-Dse-031486 Dothistroma septosporum 25.23 5.00e-33 136.00
IUUC-Fox-037678 Fusarium oxysporum 26.52 1.00e-34 142.00
IUUC-Gac-041713 Gasterosteus aculeatus 77.20 0.00e+00 1105.00
IUUC-Lma-053183 Leptosphaeria maculans 24.83 2.00e-33 137.00
IUUC-Mpo-057337 Magnaporthe poae 25.13 3.00e-27 117.00
IUUC-Nfi-068560 Neosartorya fischeri 24.58 5.00e-23 103.00
IUUC-Ont-072025 Oreochromis niloticus 79.16 0.00e+00 1137.00
IUUC-Ola-087279 Oryzias latipes 75.19 0.00e+00 1052.00
IUUC-Pma-094286 Petromyzon marinus 64.44 2.00e-177 615.00
IUUC-Pno-094905 Phaeosphaeria nodorum 27.18 1.00e-32 135.00
IUUC-Pfo-097042 Poecilia formosa 78.86 0.00e+00 1216.00
IUUC-Pgr-103483 Puccinia graminis 37.86 5.00e-58 220.00
IUUC-Ptt-103828 Puccinia triticina 34.20 5.00e-45 176.00
IUUC-Pte-104374 Pyrenophora teres 25.69 3.00e-28 120.00
IUUC-Pyt-104568 Pyrenophora triticirepentis 25.64 3.00e-32 133.00
IUUC-Ssl-108495 Sclerotinia sclerotiorum 24.94 3.00e-33 137.00
IUUC-Sre-115115 Sporisorium reilianum 35.66 4.00e-67 249.00
IUUC-Tru-117944 Takifugu rubripes 78.78 0.00e+00 1147.00
IUUC-Tni-120571 Tetraodon nigroviridis 78.26 0.00e+00 1150.00
IUUC-Tre-122113 Trichoderma reesei 27.03 1.00e-36 148.00
IUUC-Tvi-122312 Trichoderma virens 25.38 5.00e-34 139.00
IUUC-Tme-126990 Tuber melanosporum 26.70 4.00e-36 146.00
IUUC-Uma-129659 Ustilago maydis 35.73 2.00e-66 247.00
IUUC-Xtr-132330 Xenopus tropicalis 61.24 0.00e+00 909.00
Created Date 25-Jun-2017

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