iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113932

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G086700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g007180	Sb04g007180.1	Sb04g007180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-30	102.6	146	183
UBD/Beta-Prp	1.20e-44	153.5	24	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           +sv+ + +  sd t+l+s++d g +++WD+r+g+ +++
   Q: 146  GSVRTVTWlhSDqTILSSCADLGGVRLWDVRSGKIVQT 183
           68********999999*****************99985 PP

UBD/Beta-Prp

   S: 18   f...spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
           +   +pd+ +l+++s+d+   + + +tg+ + +++gh+++v++ +++ ++   ++gs D  +k+wd  tg+ +h+++ h++ v++++fs++++ l+
   Q: 24   YspvTPDGYFLISASKDSNPMLRNGETGDWIGTFQGHKGAVWSACLDTNALRAASGSADFSAKIWDALTGDVLHSFE-HKHIVRACAFSEDTHMLL 118
           335589999*****************************************99*************************.****************** PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           +G+  +++r++dl+         ++  g+v++v++  ++  +l s+++ + vrlWd+++gk+++tl+   +++v+s +++++g ++++  + ++vk
   Q: 119  TGGFEKILRIYDLNRPDATPREIDKSPGSVRTVTWLHSDqTILSSCADLGGVRLWDVRSGKIVQTLET--KSPVTSAEVSQDG-RFITTTDGSSVK 211
           *************9999998877777777777777666626666666669****************75..9**********98.88899999**** PP
   S: 206  lwdlqtgecvrtl 218
           +wd  +   v+++
   Q: 212  FWDANHFGLVKSY 224
           ***9876555555 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDKKKVAVPT VCHGHSRPVV DLFYSPVTPD GYFLISASKD SNPMLRNGET GDWIGTFQGH 60
KGAVWSACLD TNALRAASGS ADFSAKIWDA LTGDVLHSFE HKHIVRACAF SEDTHMLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATCACACT AGTACCAGTA GACTAGCAAT AGATAGATCC CCGATCCGTT AGGTCTCCAC 60
CCCCATCGCT GTAATTATCC CACAATCAAC ACCAGGAACA ATTTCTGCGT ACAAATAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_04g007180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002571	Amborella trichopoda	82.01	2.00e-168	583.00
IUUC-Aly-006421	Arabidopsis lyrata	81.90	2.00e-171	593.00
IUUC-Ath-006574	Arabidopsis thaliana	81.66	5.00e-171	592.00
IUUC-Acl-008014	Aspergillus clavatus	42.46	1.00e-57	216.00
IUUC-Afl-008701	Aspergillus flavus	42.03	3.00e-48	184.00
IUUC-Afu-008942	Aspergillus fumigatus	34.24	3.00e-45	174.00
IUUC-Ani-009394	Aspergillus nidulans	42.11	2.00e-58	218.00
IUUC-Ang-009593	Aspergillus niger	41.61	5.00e-45	174.00
IUUC-Aor-010206	Aspergillus oryzae	43.03	6.00e-61	226.00
IUUC-Ate-010461	Aspergillus terreus	35.52	1.00e-29	122.00
IUUC-Bgr-012308	Blumeria graminis	37.72	2.00e-61	228.00
IUUC-Bci-013803	Botrytis cinerea	36.95	2.00e-56	211.00
IUUC-Bdi-014996	Brachypodium distachyon	86.14	3.00e-180	622.00
IUUC-Bol-016209	Brassica oleracea	82.88	2.00e-168	583.00
IUUC-Bra-016858	Brassica rapa	84.08	9.00e-170	588.00
IUUC-Cre-022806	Chlamydomonas reinhardtii	54.27	4.00e-86	310.00
IUUC-Cin-025541	Ciona intestinalis	52.23	2.00e-82	298.00
IUUC-Csv-026287	Ciona savignyi	50.87	7.00e-81	292.00
IUUC-Cgl-026513	Colletotrichum gloeosporioides	38.27	1.00e-52	199.00
IUUC-Cne-026869	Cryptococcus neoformans	45.93	1.00e-71	262.00
IUUC-Dse-031350	Dothistroma septosporum	39.09	6.00e-57	213.00
IUUC-Dme-031857	Drosophila melanogaster	49.14	5.00e-78	283.00
IUUC-Fox-037780	Fusarium oxysporum	39.63	2.00e-55	208.00
IUUC-Fso-038197	Fusarium solani	39.44	2.00e-50	191.00
IUUC-Ggr-040054	Gaeumannomyces graminis	39.76	2.00e-56	211.00
IUUC-Gma-043984	Glycine max	82.35	3.00e-171	593.00
IUUC-Lma-053226	Leptosphaeria maculans	46.47	1.00e-61	229.00
IUUC-Mor-057256	Magnaporthe oryzae	38.89	3.00e-54	204.00
IUUC-Mpo-057303	Magnaporthe poae	38.84	2.00e-56	211.00
IUUC-Mtr-058421	Medicago truncatula	81.55	4.00e-167	579.00
IUUC-Mla-059073	Melampsora laricipopulina	45.66	4.00e-70	257.00
IUUC-Mvi-060534	Microbotryum violaceum	37.01	4.00e-40	157.00
IUUC-Mac-065617	Musa acuminata	85.09	7.00e-176	608.00
IUUC-Nfi-068553	Neosartorya fischeri	42.59	5.00e-58	217.00
IUUC-Ncr-068934	Neurospora crassa	39.27	2.00e-52	198.00
IUUC-Oin-079631	Oryza indica	85.09	4.00e-176	609.00
IUUC-Ome-081693	Oryza meridionalis	84.21	9.00e-174	601.00
IUUC-Olu-087796	Ostreococcus lucimarinus	59.11	4.00e-100	356.00
IUUC-Pno-095075	Phaeosphaeria nodorum	47.27	1.00e-63	235.00
IUUC-Ppa-095206	Physcomitrella patens	67.94	3.00e-137	480.00
IUUC-Pop-099172	Populus trichocarpa	83.53	4.00e-173	599.00
IUUC-Ppe-102035	Prunus persica	83.68	4.00e-169	586.00
IUUC-Pgr-103581	Puccinia graminis	46.30	1.00e-70	259.00
IUUC-Ptt-103862	Puccinia triticina	47.04	1.00e-69	255.00
IUUC-Pte-104245	Pyrenophora teres	46.62	7.00e-65	239.00
IUUC-Pyt-104537	Pyrenophora triticirepentis	46.62	7.00e-65	239.00
IUUC-Ssl-108655	Sclerotinia sclerotiorum	36.95	1.00e-55	209.00
IUUC-Smo-108784	Selaginella moellendorffii	69.79	2.00e-138	484.00
IUUC-Sit-110760	Setaria italica	94.13	0.00e+00	675.00
IUUC-Sly-111555	Solanum lycopersicum	77.39	3.00e-160	556.00
IUUC-Stu-111953	Solanum tuberosum	77.68	4.00e-161	559.00
IUUC-Sre-115008	Sporisorium reilianum	43.23	4.00e-66	243.00
IUUC-Tca-121759	Theobroma cacao	83.14	2.00e-172	597.00
IUUC-Tvi-122609	Trichoderma virens	37.89	2.00e-52	198.00
IUUC-Tae-123833	Triticum aestivum	85.67	1.00e-179	621.00
IUUC-Tur-126808	Triticum urartu	77.42	4.00e-152	529.00
IUUC-Tme-127137	Tuber melanosporum	48.31	3.00e-66	244.00
IUUC-Uma-129433	Ustilago maydis	45.34	3.00e-67	247.00
IUUC-Vda-129675	Verticillium dahliae	38.18	4.00e-54	204.00
IUUC-Vvi-131432	Vitis vinifera	82.35	5.00e-170	588.00
IUUC-Yli-134670	Yarrowia lipolytica	36.16	7.00e-48	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence