iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2771__AT3G62770.2	fgenesh2_kg.5__2771__AT3G62770.2	fgenesh2_kg.5__2771__AT3G62770.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-10	40.7	247	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgvl 35
           H +++ c+a+ +d +ll+++s  gt ++v+++ +g+l
   Q: 247  HDSRIACFALtQDgHLLATASSKGTlVRVFNTVDGTL 283
           99*********88899***************999976 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATVSSSSWP NPNPNPDPTS ASDSDSTFPS HRDRGDETDS LDSFSSMSLN SDEPNQNSNQ 60
SPISPPTPNL PVTPPPSVLH LSFNQDHACF AVGTDRGFRI LNCDPFREIF RRDFDRGGGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAACAAGC AAAGCACGAA GTCATCTTCT TCTTCCTATT TCTCTATTCC TCCTTCTCCA 60
CGCTTCTTCT TCTTCTTCCT CAATCTCTCT TACGATTCCT TCGAATACCT TCTTCCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0006914--P:autophagy
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0010508--P:positive regulation of autophagy
GO:0006979--P:response to oxidative stress
GO:0009651--P:response to salt stress
GO:0042594--P:response to starvation
GO:0009414--P:response to water deprivation

KEGG

aly:ARALYDRAFT_486779

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006629	Arabidopsis thaliana	96.89	0.00e+00	640.00
IUUC-Bol-015119	Brassica oleracea	88.32	0.00e+00	673.00
IUUC-Bra-017319	Brassica rapa	88.41	0.00e+00	636.00
IUUC-Dme-031881	Drosophila melanogaster	42.32	4.00e-61	227.00
IUUC-Gmo-038583	Gadus morhua	35.80	1.00e-56	213.00
IUUC-Gma-043639	Glycine max	71.79	9.00e-151	525.00
IUUC-Ggo-045610	Gorilla gorilla	33.88	5.00e-55	207.00
IUUC-Lma-053076	Leptosphaeria maculans	32.56	6.00e-43	167.00
IUUC-Mtr-057850	Medicago truncatula	75.70	1.00e-147	515.00
IUUC-Mvi-060462	Microbotryum violaceum	37.65	2.00e-46	179.00
IUUC-Mac-065043	Musa acuminata	66.57	1.00e-124	439.00
IUUC-Obr-076316	Oryza brachyantha	73.62	8.00e-120	422.00
IUUC-Olo-080794	Oryza longistaminata	67.81	3.00e-135	474.00
IUUC-Olu-087808	Ostreococcus lucimarinus	49.45	2.00e-94	338.00
IUUC-Pma-094403	Petromyzon marinus	36.36	2.00e-55	208.00
IUUC-Ppe-101963	Prunus persica	78.04	9.00e-163	565.00
IUUC-Pyt-104738	Pyrenophora triticirepentis	29.39	7.00e-37	147.00
IUUC-Stu-111954	Solanum tuberosum	70.62	7.00e-149	519.00
IUUC-Sre-115219	Sporisorium reilianum	35.86	7.00e-38	150.00
IUUC-Tca-121459	Theobroma cacao	78.63	4.00e-150	523.00
IUUC-Yli-134566	Yarrowia lipolytica	35.61	6.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence