iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Opu-083136

Ensembl Protein ID

OPUNC08G09310.1

UniProt Accession

A0A0E0LTL5; A0A0E0LTL5_ORYPU

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OPUNC08G09310	OPUNC08G09310.1	OPUNC08G09310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-26	90.1	50	87
UBD/Beta-Prp	2.00e-41	143.0	6	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++   d t+l++Gs D t k+WD+ tg+ l
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGREL 87
           8***********777*******************9876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......... 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +          
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGRELFTfrfdaparsv 99
           489******************************************************************************************* PP
   S: 132  .........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtd 181
                                                    + +g +g +n +v+ p ++ +++++ D t+r+Wd +tg++l++    + gh++
   Q: 100  efaigdglavittdnfmenvptaqvkriaedpddqsedsllVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESdkeQ-GHQK 192
           **************************************************************************************955.5*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
            ++sls + +  ++++gsld++ klwd +t + ++t+   + +v+ v+ sp  +++v g+
   Q: 193  TITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTER-PVNAVDISPLLDHVVIGG 251
           ************************************98754.566666665444444443 PP

Organism

Oryza punctata

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYRG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGRELFTF RFDAPARSVE FAIGDGLAVI TTDNFMENVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCACTACCT GCCAGCACAA AATCGCCAAC CCACCCGCGA GCTAGGGTTT TTCCGCGCCG 60
CCTCACACCG CACGATCCAG ATCCCCACCT CCTCTCTCCC TAACCTTACC ACCCTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001321	Ailuropoda melanoleuca	45.23	3.00e-84	304.00
IUUC-Atr-002468	Amborella trichopoda	72.84	3.00e-98	350.00
IUUC-Apl-003841	Anas platyrhynchos	45.23	3.00e-85	307.00
IUUC-Aca-005123	Anolis carolinensis	44.79	2.00e-86	311.00
IUUC-Aly-005473	Arabidopsis lyrata	78.66	3.00e-155	540.00
IUUC-Ath-007094	Arabidopsis thaliana	77.44	4.00e-153	533.00
IUUC-Ago-008000	Ashbya gossypii	41.30	1.00e-73	269.00
IUUC-Acl-008098	Aspergillus clavatus	44.71	7.00e-79	286.00
IUUC-Afl-008494	Aspergillus flavus	45.57	2.00e-82	298.00
IUUC-Afu-009080	Aspergillus fumigatus	43.81	1.00e-77	282.00
IUUC-Ani-009230	Aspergillus nidulans	45.73	9.00e-82	296.00
IUUC-Aor-010114	Aspergillus oryzae	45.57	2.00e-82	298.00
IUUC-Ate-010285	Aspergillus terreus	44.65	2.00e-79	288.00
IUUC-Ame-011534	Astyanax mexicanus	46.34	6.00e-87	313.00
IUUC-Bgr-012121	Blumeria graminis	42.90	7.00e-75	273.00
IUUC-Bta-013143	Bos taurus	45.40	7.00e-85	306.00
IUUC-Bci-013950	Botrytis cinerea	46.48	6.00e-83	300.00
IUUC-Bdi-015019	Brachypodium distachyon	90.18	7.00e-177	612.00
IUUC-Bol-015709	Brassica oleracea	77.58	3.00e-154	538.00
IUUC-Bra-017760	Brassica rapa	77.58	1.00e-155	542.00
IUUC-Cel-018226	Caenorhabditis elegans	39.75	1.00e-71	262.00
IUUC-Cja-019741	Callithrix jacchus	45.09	9.00e-85	306.00
IUUC-Cfa-021204	Canis familiaris	44.92	5.00e-84	303.00
IUUC-Cpo-021661	Cavia porcellus	44.92	5.00e-84	303.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	52.76	9.00e-103	365.00
IUUC-Csa-024038	Chlorocebus sabaeus	45.09	9.00e-85	306.00
IUUC-Cin-025597	Ciona intestinalis	48.16	1.00e-90	325.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	44.51	2.00e-78	285.00
IUUC-Cne-026838	Cryptococcus neoformans	43.16	1.00e-78	285.00
IUUC-Cme-027304	Cyanidioschyzon merolae	53.09	1.00e-90	325.00
IUUC-Dre-028567	Danio rerio	45.40	2.00e-87	315.00
IUUC-Dno-029171	Dasypus novemcinctus	45.23	8.00e-84	303.00
IUUC-Dse-031191	Dothistroma septosporum	43.47	3.00e-79	287.00
IUUC-Dme-031879	Drosophila melanogaster	47.99	2.00e-89	321.00
IUUC-Eca-033259	Equus caballus	44.92	6.00e-84	303.00
IUUC-Eeu-035153	Erinaceus europaeus	42.34	1.00e-25	109.00
IUUC-Fca-036489	Felis catus	44.92	6.00e-84	303.00
IUUC-Fal-037485	Ficedula albicollis	44.92	5.00e-85	306.00
IUUC-Fox-037860	Fusarium oxysporum	44.75	5.00e-79	286.00
IUUC-Fso-038188	Fusarium solani	44.62	2.00e-78	285.00
IUUC-Gmo-039311	Gadus morhua	44.92	3.00e-85	307.00
IUUC-Ggr-040045	Gaeumannomyces graminis	45.54	8.00e-80	290.00
IUUC-Gga-040645	Gallus gallus	44.31	8.00e-84	303.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.71	1.00e-84	305.00
IUUC-Gma-043930	Glycine max	83.13	1.00e-163	568.00
IUUC-Ggo-045578	Gorilla gorilla	45.09	9.00e-85	306.00
IUUC-Hsa-046734	Homo sapiens	45.09	9.00e-85	306.00
IUUC-Hvu-047553	Hordeum vulgare	89.88	8.00e-177	612.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	44.92	1.00e-83	302.00
IUUC-Kpa-049325	Komagataella pastoris	45.26	8.00e-80	289.00
IUUC-Lch-049620	Latimeria chalumnae	45.85	5.00e-79	286.00
IUUC-Lpe-051338	Leersia perrieri	93.57	2.00e-176	610.00
IUUC-Loc-052094	Lepisosteus oculatus	40.92	7.00e-73	266.00
IUUC-Lma-053047	Leptosphaeria maculans	46.63	6.00e-84	303.00
IUUC-Laf-053801	Loxodonta africana	45.14	1.00e-81	295.00
IUUC-Mcc-055498	Macaca mulatta	39.88	3.00e-65	241.00
IUUC-Meu-056729	Macropus eugenii	42.07	4.00e-76	277.00
IUUC-Mor-057025	Magnaporthe oryzae	44.92	9.00e-78	283.00
IUUC-Mpo-057511	Magnaporthe poae	47.24	3.00e-80	291.00
IUUC-Mtr-058051	Medicago truncatula	82.82	4.00e-164	569.00
IUUC-Mla-059061	Melampsora laricipopulina	43.56	2.00e-79	288.00
IUUC-Mga-059229	Meleagris gallopavo	44.65	9.00e-83	299.00
IUUC-Mvi-060399	Microbotryum violaceum	43.15	4.00e-76	277.00
IUUC-Mmr-060764	Microcebus murinus	45.40	2.00e-85	308.00
IUUC-Mdo-062088	Monodelphis domestica	45.26	3.00e-85	307.00
IUUC-Mmu-064304	Mus musculus	45.09	5.00e-85	306.00
IUUC-Mac-065520	Musa acuminata	82.55	8.00e-162	561.00
IUUC-Mpu-066340	Mustela putorius furo	44.92	6.00e-84	303.00
IUUC-Mlu-067111	Myotis lucifugus	45.23	2.00e-84	305.00
IUUC-Nfi-068478	Neosartorya fischeri	44.11	1.00e-78	285.00
IUUC-Ncr-068820	Neurospora crassa	46.30	9.00e-80	289.00
IUUC-Nle-069903	Nomascus leucogenys	44.92	3.00e-84	304.00
IUUC-Opr-070221	Ochotona princeps	44.17	4.00e-82	297.00
IUUC-Ont-071765	Oreochromis niloticus	46.01	8.00e-88	316.00
IUUC-Oan-073660	Ornithorhynchus anatinus	43.69	2.00e-71	261.00
IUUC-Ocu-074039	Oryctolagus cuniculus	44.92	4.00e-84	303.00
IUUC-Oba-075395	Oryza barthii	90.80	1.00e-172	598.00
IUUC-Obr-076334	Oryza brachyantha	93.25	0.00e+00	625.00
IUUC-Ogl-077751	Oryza glaberrima	99.69	0.00e+00	672.00
IUUC-Ogu-078207	Oryza glumaepatula	96.92	0.00e+00	653.00
IUUC-Oin-079878	Oryza indica	97.55	0.00e+00	657.00
IUUC-Olo-080677	Oryza longistaminata	85.53	0.00e+00	642.00
IUUC-Oni-082411	Oryza nivara	87.73	7.00e-165	572.00
IUUC-Oru-084916	Oryza rufipogon	94.93	0.00e+00	652.00
IUUC-Osa-085776	Oryza sativa	99.69	0.00e+00	672.00
IUUC-Ola-087053	Oryzias latipes	46.01	5.00e-87	313.00
IUUC-Olu-087602	Ostreococcus lucimarinus	60.12	1.00e-115	408.00
IUUC-Oga-088154	Otolemur garnettii	45.23	1.00e-84	305.00
IUUC-Oar-089915	Ovis aries	45.23	3.00e-84	304.00
IUUC-Ptr-091124	Pan troglodytes	37.31	6.00e-57	213.00
IUUC-Pan-092035	Papio anubis	45.09	9.00e-85	306.00
IUUC-Psi-094096	Pelodiscus sinensis	47.15	2.00e-51	194.00
IUUC-Pno-094988	Phaeosphaeria nodorum	43.08	2.00e-73	268.00
IUUC-Ppa-095536	Physcomitrella patens	76.07	6.00e-151	526.00
IUUC-Pfo-096101	Poecilia formosa	45.09	8.00e-87	312.00
IUUC-Pab-097726	Pongo abelii	45.09	9.00e-85	306.00
IUUC-Pop-099617	Populus trichocarpa	79.14	2.00e-157	547.00
IUUC-Pca-101014	Procavia capensis	45.40	4.00e-85	307.00
IUUC-Ppe-101320	Prunus persica	82.21	3.00e-162	563.00
IUUC-Pgr-103479	Puccinia graminis	43.87	5.00e-80	290.00
IUUC-Ptt-103981	Puccinia triticina	43.87	1.00e-80	292.00
IUUC-Pte-104278	Pyrenophora teres	45.23	7.00e-81	293.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	45.23	7.00e-81	293.00
IUUC-Rno-105867	Rattus norvegicus	41.99	2.00e-69	254.00
IUUC-Sce-106251	Saccharomyces cerevisiae	40.96	7.00e-74	270.00
IUUC-Sha-107039	Sarcophilus harrisii	45.26	4.00e-85	307.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.17	7.00e-82	296.00
IUUC-Spo-108314	Schizosaccharomyces pombe	46.32	9.00e-88	316.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	46.18	8.00e-83	299.00
IUUC-Smo-108728	Selaginella moellendorffii	73.23	1.00e-144	504.00
IUUC-Sit-110801	Setaria italica	91.72	0.00e+00	625.00
IUUC-Sly-111326	Solanum lycopersicum	78.83	2.00e-156	544.00
IUUC-Stu-112458	Solanum tuberosum	80.67	2.00e-158	551.00
IUUC-Sbi-114063	Sorghum bicolor	90.49	4.00e-179	619.00
IUUC-Sre-115096	Sporisorium reilianum	44.21	3.00e-76	277.00
IUUC-Ssc-116080	Sus scrofa	45.40	5.00e-85	306.00
IUUC-Tgu-116988	Taeniopygia guttata	44.92	6.00e-85	306.00
IUUC-Tru-118766	Takifugu rubripes	45.97	9.00e-87	312.00
IUUC-Tni-120197	Tetraodon nigroviridis	45.71	4.00e-87	313.00
IUUC-Tca-121316	Theobroma cacao	83.13	4.00e-163	566.00
IUUC-Tre-122097	Trichoderma reesei	45.90	1.00e-78	286.00
IUUC-Tvi-122442	Trichoderma virens	45.29	1.00e-77	282.00
IUUC-Tae-125800	Triticum aestivum	89.57	5.00e-176	609.00
IUUC-Tur-126334	Triticum urartu	79.45	1.00e-149	521.00
IUUC-Tme-127038	Tuber melanosporum	45.57	1.00e-83	302.00
IUUC-Ttr-128659	Tursiops truncatus	42.94	5.00e-66	243.00
IUUC-Uma-129464	Ustilago maydis	44.51	6.00e-76	276.00
IUUC-Vda-129841	Verticillium dahliae	45.09	2.00e-78	285.00
IUUC-Vvi-131076	Vitis vinifera	81.29	2.00e-162	564.00
IUUC-Xtr-132395	Xenopus tropicalis	46.63	4.00e-87	313.00
IUUC-Xma-133383	Xiphophorus maculatus	45.09	1.00e-86	312.00
IUUC-Yli-134586	Yarrowia lipolytica	44.24	2.00e-68	251.00
IUUC-Zma-135904	Zea mays	90.80	3.00e-180	623.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence