iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112219

Ensembl Protein ID

PGSC0003DMT400016356

UniProt Accession

M1A7J3; M1A7J3_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006393	PGSC0003DMT400016356	PGSC0003DMT400016356
PGSC0003DMG400006393	PGSC0003DMT400016357	PGSC0003DMT400016357

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	4.40e-16	60.1	230	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrtlt..........................elknsevalkYeDedGDlvtlksDedld 64
           +++kvs++g+++++++dl+ +  +++L +a++++                            l +se+ l+YeD+dGD++ l++D++++
   Q: 230  LFIKVSMDGAPYLRKVDLRTYSAYQELSSALEKMIscftigqygshgapgkdllsesklkdLLHGSEYVLTYEDKDGDWM-LVGDVPWE 317
           58*******************************33456799*******************99999***************.******** PP
   S: 65   kavsllaskksllrlliqk 83
           ++++       ++rl+i+k
   Q: 318  MFID------TCKRLRIMK 330
           ****......9******98 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPLLGVGE EEGQSNVTLL ASSTSLGSIC KKGSALKERN YMGLSDCSSV DSCNISTSSE 60
DNNGCGLNLK ATELRLGLPG SQSPERGEET CPVSSTKVDE KLLFPLHPAK DTAFSVSQKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAAATAAG CTTTTGTTAC TGTCTGCCAA ATGGAGGGTC CTTAGTTTTT TTTCTCTCTC 60
TCTTTCTGCT ACCAAAAAAT AGCCTCACTA CTCCACCATC ATCTTCTTCT TCCTTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	56.89	2.00e-108	384.00
IUUC-Aly-005481	Arabidopsis lyrata	61.27	1.00e-100	358.00
IUUC-Ath-007607	Arabidopsis thaliana	61.27	3.00e-100	357.00
IUUC-Bol-015732	Brassica oleracea	56.85	3.00e-97	347.00
IUUC-Bra-017890	Brassica rapa	53.26	8.00e-76	275.00
IUUC-Cpo-136433	Cavia porcellus	34.15	1.10e+00	27.70
IUUC-Gma-043352	Glycine max	62.97	8.00e-116	409.00
IUUC-Ggo-044913	Gorilla gorilla	26.83	6.40e-01	28.10
IUUC-Mtr-058323	Medicago truncatula	64.60	5.00e-115	406.00
IUUC-Mac-064563	Musa acuminata	56.23	4.00e-84	303.00
IUUC-Mpu-136562	Mustela putorius furo	34.15	5.20e-01	28.90
IUUC-Ome-081266	Oryza meridionalis	59.33	7.00e-51	192.00
IUUC-Oga-136615	Otolemur garnettii	34.15	8.00e-01	28.10
IUUC-Ppa-095740	Physcomitrella patens	41.44	1.00e-33	136.00
IUUC-Pop-099102	Populus trichocarpa	69.57	1.00e-128	451.00
IUUC-Ppe-101376	Prunus persica	63.25	1.00e-122	431.00
IUUC-Pyt-104615	Pyrenophora triticirepentis	37.21	2.00e-01	28.50
IUUC-Smo-109586	Selaginella moellendorffii	35.03	1.00e-44	172.00
IUUC-Sly-111221	Solanum lycopersicum	49.05	2.00e-71	260.00
IUUC-Tca-121378	Theobroma cacao	69.92	4.00e-125	439.00
IUUC-Vvi-131708	Vitis vinifera	72.49	2.00e-125	440.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence