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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Sce-106316
UUCD1 version UUC-SaC-00203
Ensembl Protein ID YLR247C
UniProt Accession Q06554; D6VYP5; IRC20_YEAST
Genbank Protein ID AAB67400.1; DAA09561.1
Protein Name Uncharacterized ATP-dependent helicase IRC20; Increased recombination centers protein 20
Genbank Nucleotide ID U20865; BK006945
Gene Name IRC20; YLR247C
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YLR247C YLR247C YLR247C
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
CPLMdbPAFdbPTMUniProt
BioGRID
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 24155900
Classification
Family E-value Score Start End
E3 activity/RING/RING 4.20e-06 25.6 1239 1277
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl + + g +   CgH f+++C+  w       + + +CP+C+
   Q: 1239 CSICLGEVEIGAI-IKCGHYFCKSCILTW------LRAHSKCPICK 1277
           ********99555.99*************......**********6 PP
   
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     By heat shock and UV radiation.
 By heat shock and UV radiation.
Protein Sequence
(Fasta)
MSAVGALLAR EYNVTAEKCD FFLENGSFDS VIAALPALNQ EQETVTQKVS KNGKELINVA 60
SVNIEIPERI SLSNNGRQLF KFIVDIEILP CENDNEATLV VSSDSVSLFQ IGFKMENNSK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sce-106316|E3,RING|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCTGCAG TAGGTGCGCT ATTAGCAAGG GAGTACAACG TGACTGCCGA AAAATGCGAC 60
TTTTTCCTAG AAAATGGTTC TTTTGATTCA GTGATAGCAG CATTGCCAGC GCTAAATCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106316|E3,RING|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0346--Stress response
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00271--Helicase_C
PF00176--SNF2_N
SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING
Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006303--P:double-strand break repair via nonhomologous end joining
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing
KEGG sce:YLR247C
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ago-007786 Ashbya gossypii 38.78 0.00e+00 923.00
IUUC-Acl-008380 Aspergillus clavatus 24.82 2.00e-83 302.00
IUUC-Afu-008890 Aspergillus fumigatus 26.87 6.00e-98 350.00
IUUC-Ani-009351 Aspergillus nidulans 26.19 5.00e-93 334.00
IUUC-Ang-009583 Aspergillus niger 25.54 2.00e-89 322.00
IUUC-Aor-009893 Aspergillus oryzae 25.15 2.00e-47 182.00
IUUC-Ate-010385 Aspergillus terreus 26.04 7.00e-86 310.00
IUUC-Bgr-012295 Blumeria graminis 25.52 1.00e-76 280.00
IUUC-Bci-013701 Botrytis cinerea 26.25 2.00e-88 319.00
IUUC-Cho-024617 Choloepus hoffmanni 35.66 1.00e-18 87.40
IUUC-Cgl-026624 Colletotrichum gloeosporioides 25.92 2.00e-93 335.00
IUUC-Cne-027060 Cryptococcus neoformans 24.84 5.00e-24 105.00
IUUC-Dse-031372 Dothistroma septosporum 23.74 7.00e-88 317.00
IUUC-Dme-031785 Drosophila melanogaster 28.72 7.00e-20 91.30
IUUC-Fox-038048 Fusarium oxysporum 25.08 6.00e-42 164.00
IUUC-Fso-038224 Fusarium solani 25.66 3.00e-83 301.00
IUUC-Ggr-040102 Gaeumannomyces graminis 24.70 6.00e-81 294.00
IUUC-Kpa-049196 Komagataella pastoris 26.90 5.00e-109 387.00
IUUC-Lma-053266 Leptosphaeria maculans 23.85 3.00e-56 211.00
IUUC-Meu-056104 Macropus eugenii 46.75 1.00e-15 77.80
IUUC-Mor-057226 Magnaporthe oryzae 23.01 2.00e-41 162.00
IUUC-Mpo-057528 Magnaporthe poae 26.38 2.00e-44 173.00
IUUC-Mvi-060213 Microbotryum violaceum 23.73 6.00e-67 248.00
IUUC-Nfi-068264 Neosartorya fischeri 26.58 1.00e-97 349.00
IUUC-Ncr-068745 Neurospora crassa 24.78 6.00e-85 307.00
IUUC-Pno-095005 Phaeosphaeria nodorum 25.44 1.00e-39 157.00
IUUC-Pte-104081 Pyrenophora teres 31.64 6.00e-38 151.00
IUUC-Pyt-104477 Pyrenophora triticirepentis 29.52 1.00e-39 157.00
IUUC-Sja-107755 Schizosaccharomyces japonicus 22.70 5.00e-32 131.00
IUUC-Spo-108132 Schizosaccharomyces pombe 23.61 9.00e-63 233.00
IUUC-Ssl-108615 Sclerotinia sclerotiorum 22.70 7.00e-33 134.00
IUUC-Sre-115189 Sporisorium reilianum 26.16 7.00e-40 158.00
IUUC-Tre-122005 Trichoderma reesei 25.63 1.00e-83 303.00
IUUC-Tvi-122328 Trichoderma virens 24.93 3.00e-82 298.00
IUUC-Uma-129442 Ustilago maydis 25.13 4.00e-36 145.00
IUUC-Vda-129795 Verticillium dahliae 23.81 1.00e-74 273.00
IUUC-Yli-134508 Yarrowia lipolytica 25.86 7.00e-44 171.00
Created Date 25-Jun-2017

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