iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G33630	GLYMA09G33630.1	GLYMA09G33630.1
GLYMA09G33630	GLYMA09G33630.2	GLYMA09G33630.2
GLYMA09G33630	GLYMA09G33630.3	GLYMA09G33630.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.60e-17	63.3	234	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt.........................elknsevalkYeDedGDlvtlksDedldkavs 68
           ++vkvs++g+++++++dl++++++++L +a+++  l                           l +se+ l+YeD+dGD++ l++D++++++++
   Q: 234  LFVKVSMDGAPYLRKVDLRSYTTYQELSSALEKmfLScftlgqcgshgapgremlsesklrdLLHGSEYVLTYEDKDGDWM-LVGDVPWEMFIE 326
           58*******************************651167799*******************99999***************.************ PP
   S: 69   llaskksllrlliqk 83
                  ++rl i+k
   Q: 327  ------TCKRLKIMK 335
           ......899999997 PP

Organism

Glycine max

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPTLVTEE EGRSTVASDS SQSLDCFSQN GAGLKERNYL GLSDCSSVDS CASTVPSLCD 60
EKKENMNLKA TELRLGLPGF QSPEREPDLF SLSSPKLDEK PLFPLLPTKD GICSSGQKAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACTATT ATTATTATTA TGTTTAATTG CTCTTGTTTG GTTTTTCTGT CTTAAGGCTT 60
CATTCATTGA GCTTTTCTCT TCTTATTTCT ATTTCTCTCT CCCCAAAAGC TTTTGTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

gmx:100785203

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	57.30	1.00e-103	369.00
IUUC-Dre-027732	Danio rerio	22.39	6.40e-01	28.50
IUUC-Ptt-103801	Puccinia triticina	29.09	1.90e+00	27.70
IUUC-Pte-104050	Pyrenophora teres	36.21	7.50e-01	30.40
IUUC-Pyt-104654	Pyrenophora triticirepentis	36.21	8.70e-01	30.00
IUUC-Ssc-116180	Sus scrofa	24.42	7.90e-01	28.10

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence