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Tag Content
UUCD2 ID IUUC-Ocu-073764
UUCD1 version UUC-OrC-00533
Ensembl Protein ID ENSOCUP00000012543.3
UniProt Accession G1T7P9; G1T7P9_RABIT
Genbank Protein ID ENSOCUP00000012543
Protein Name Uncharacterized protein
Genbank Nucleotide ID AAGW02062729
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000014588.3 ENSOCUT00000014590.3 ENSOCUP00000012543.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.40e-46 153.2 192 226
UBD/Beta-Prp 1.10e-79 267.7 105 308
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 192  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 226
           8*******9659955588999***********876 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 105  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 192
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 193  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 279
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 280  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 308
           ***************************98 PP
   
Organism Oryctolagus cuniculus
Protein Sequence
(Fasta)
MLEADWFIQT GSPGGRTKSE PIARRLELSV WSVAALRKAS AAMIEQQKRK GPELPLVPVK 60
RQRHELLLGA AGSGPGTGQQ QATPGALLQA GPPRCSSLQA PIMLLSGHEG EVYCCKFHPN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ocu-073764|E3,WD_repeat;UBD,Beta-Prp|Oryctolagus cuniculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTATGACCA ATAACAAGAG ACTATTCAGA GGGCGTTGCA GCGGGGAATG CTGGAAGCCG 60
ATTGGTTCAT TCAAACAGGA AGTCCTGGAG GAAGGACAAA ATCGGAACCA ATCGCACGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ocu-073764|E3,WD_repeat;UBD,Beta-Prp|Oryctolagus cuniculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 56.38 7.00e-121 427.00
IUUC-Aml-001428 Ailuropoda melanoleuca 96.78 0.00e+00 627.00
IUUC-Atr-003164 Amborella trichopoda 58.99 6.00e-122 430.00
IUUC-Apl-003447 Anas platyrhynchos 97.21 9.00e-163 565.00
IUUC-Aca-004270 Anolis carolinensis 84.17 9.00e-170 588.00
IUUC-Aly-005659 Arabidopsis lyrata 59.58 8.00e-125 439.00
IUUC-Ath-006764 Arabidopsis thaliana 58.98 2.00e-124 438.00
IUUC-Acl-008324 Aspergillus clavatus 47.08 4.00e-95 341.00
IUUC-Afl-008607 Aspergillus flavus 49.66 2.00e-89 322.00
IUUC-Afu-008998 Aspergillus fumigatus 47.08 3.00e-95 341.00
IUUC-Ani-009363 Aspergillus nidulans 46.49 2.00e-95 342.00
IUUC-Ang-009513 Aspergillus niger 48.51 6.00e-85 307.00
IUUC-Aor-010237 Aspergillus oryzae 47.95 7.00e-96 343.00
IUUC-Ate-010374 Aspergillus terreus 46.20 4.00e-83 301.00
IUUC-Ame-010728 Astyanax mexicanus 83.89 2.00e-172 598.00
IUUC-Bgr-012297 Blumeria graminis 46.15 3.00e-70 258.00
IUUC-Bta-012433 Bos taurus 99.44 0.00e+00 657.00
IUUC-Bci-013763 Botrytis cinerea 48.69 7.00e-96 343.00
IUUC-Bdi-014490 Brachypodium distachyon 57.01 6.00e-120 423.00
IUUC-Bol-016479 Brassica oleracea 61.86 2.00e-124 438.00
IUUC-Bra-017219 Brassica rapa 62.14 2.00e-124 438.00
IUUC-Cel-018512 Caenorhabditis elegans 56.35 2.00e-114 405.00
IUUC-Cja-019308 Callithrix jacchus 98.88 0.00e+00 659.00
IUUC-Cfa-020998 Canis familiaris 99.16 0.00e+00 662.00
IUUC-Cpo-021580 Cavia porcellus 98.60 0.00e+00 657.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 53.37 6.00e-108 383.00
IUUC-Csa-023456 Chlorocebus sabaeus 96.37 0.00e+00 657.00
IUUC-Cho-024644 Choloepus hoffmanni 99.68 3.00e-180 623.00
IUUC-Cin-025463 Ciona intestinalis 59.42 3.00e-127 447.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 46.65 3.00e-95 341.00
IUUC-Cne-026780 Cryptococcus neoformans 39.45 2.00e-67 249.00
IUUC-Dre-027671 Danio rerio 81.39 3.00e-177 613.00
IUUC-Dno-029769 Dasypus novemcinctus 98.88 0.00e+00 666.00
IUUC-Dor-030776 Dipodomys ordii 98.31 2.00e-86 311.00
IUUC-Dse-031316 Dothistroma septosporum 43.99 2.00e-87 315.00
IUUC-Dme-031756 Drosophila melanogaster 61.78 7.00e-125 439.00
IUUC-Ete-032753 Echinops telfairi 89.39 3.00e-165 573.00
IUUC-Eca-033979 Equus caballus 99.16 0.00e+00 657.00
IUUC-Eeu-034862 Erinaceus europaeus 100.00 1.00e-72 266.00
IUUC-Fca-036110 Felis catus 99.03 1.00e-160 558.00
IUUC-Fal-037648 Ficedula albicollis 97.10 3.00e-177 613.00
IUUC-Fox-037861 Fusarium oxysporum 46.28 1.00e-91 329.00
IUUC-Fso-038405 Fusarium solani 46.28 3.00e-91 328.00
IUUC-Gmo-039383 Gadus morhua 83.06 8.00e-173 599.00
IUUC-Ggr-040082 Gaeumannomyces graminis 44.28 7.00e-84 303.00
IUUC-Gga-040785 Gallus gallus 90.86 0.00e+00 625.00
IUUC-Gac-041645 Gasterosteus aculeatus 83.06 2.00e-170 591.00
IUUC-Gma-044329 Glycine max 60.44 1.00e-122 432.00
IUUC-Ggo-044800 Gorilla gorilla 86.88 6.00e-159 553.00
IUUC-Hsa-045918 Homo sapiens 96.37 0.00e+00 657.00
IUUC-Hvu-047342 Hordeum vulgare 56.05 2.00e-120 425.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 99.09 2.00e-113 400.00
IUUC-Kpa-049149 Komagataella pastoris 34.30 1.00e-36 146.00
IUUC-Lch-050395 Latimeria chalumnae 86.91 0.00e+00 657.00
IUUC-Lpe-051275 Leersia perrieri 57.31 6.00e-121 427.00
IUUC-Loc-052666 Lepisosteus oculatus 85.91 2.00e-173 601.00
IUUC-Lma-053129 Leptosphaeria maculans 44.06 7.00e-89 320.00
IUUC-Laf-054512 Loxodonta africana 96.09 0.00e+00 651.00
IUUC-Mcc-055819 Macaca mulatta 92.50 0.00e+00 703.00
IUUC-Meu-056350 Macropus eugenii 82.83 8.00e-160 556.00
IUUC-Mor-057063 Magnaporthe oryzae 48.42 9.00e-92 330.00
IUUC-Mpo-057369 Magnaporthe poae 45.18 1.00e-84 306.00
IUUC-Mtr-058228 Medicago truncatula 60.19 5.00e-122 430.00
IUUC-Mla-059093 Melampsora laricipopulina 39.55 1.00e-69 256.00
IUUC-Mga-059719 Meleagris gallopavo 96.82 6.00e-179 619.00
IUUC-Mvi-060285 Microbotryum violaceum 40.06 1.00e-63 236.00
IUUC-Mmr-061685 Microcebus murinus 93.30 5.00e-172 596.00
IUUC-Mdo-062121 Monodelphis domestica 91.69 0.00e+00 638.00
IUUC-Mmu-063216 Mus musculus 98.32 0.00e+00 667.00
IUUC-Mac-065463 Musa acuminata 54.79 6.00e-111 393.00
IUUC-Mpu-066390 Mustela putorius furo 98.88 0.00e+00 672.00
IUUC-Mlu-066932 Myotis lucifugus 98.54 0.00e+00 630.00
IUUC-Nfi-068509 Neosartorya fischeri 47.08 4.00e-95 341.00
IUUC-Ncr-068870 Neurospora crassa 47.95 1.00e-92 333.00
IUUC-Nle-069539 Nomascus leucogenys 91.23 0.00e+00 672.00
IUUC-Opr-070555 Ochotona princeps 87.15 2.00e-168 584.00
IUUC-Ont-071490 Oreochromis niloticus 82.55 3.00e-170 590.00
IUUC-Oan-073044 Ornithorhynchus anatinus 79.34 3.00e-154 537.00
IUUC-Oba-075704 Oryza barthii 58.75 8.00e-121 426.00
IUUC-Obr-076455 Oryza brachyantha 59.06 1.00e-120 426.00
IUUC-Ogl-077382 Oryza glaberrima 59.06 5.00e-121 427.00
IUUC-Ogu-078739 Oryza glumaepatula 58.75 6.00e-121 426.00
IUUC-Oin-079072 Oryza indica 58.75 6.00e-121 426.00
IUUC-Olo-080809 Oryza longistaminata 58.75 6.00e-121 426.00
IUUC-Ome-081677 Oryza meridionalis 58.75 2.00e-120 425.00
IUUC-Oni-082937 Oryza nivara 58.75 6.00e-121 426.00
IUUC-Opu-083510 Oryza punctata 58.75 6.00e-121 426.00
IUUC-Oru-084360 Oryza rufipogon 58.75 1.00e-120 426.00
IUUC-Osa-085640 Oryza sativa 58.75 7.00e-121 426.00
IUUC-Ola-086504 Oryzias latipes 82.22 1.00e-171 595.00
IUUC-Olu-087869 Ostreococcus lucimarinus 41.64 3.00e-63 234.00
IUUC-Oga-088773 Otolemur garnettii 99.44 0.00e+00 660.00
IUUC-Oar-089677 Ovis aries 98.61 0.00e+00 652.00
IUUC-Ptr-090724 Pan troglodytes 96.21 0.00e+00 627.00
IUUC-Pan-092683 Papio anubis 96.37 0.00e+00 657.00
IUUC-Psi-093415 Pelodiscus sinensis 98.05 9.00e-177 612.00
IUUC-Pma-094562 Petromyzon marinus 76.88 8.00e-171 592.00
IUUC-Pno-095014 Phaeosphaeria nodorum 47.27 5.00e-89 321.00
IUUC-Ppa-095728 Physcomitrella patens 57.79 2.00e-122 431.00
IUUC-Pfo-096579 Poecilia formosa 82.50 4.00e-169 587.00
IUUC-Pab-098313 Pongo abelii 96.37 0.00e+00 657.00
IUUC-Pop-099747 Populus trichocarpa 60.31 7.00e-124 436.00
IUUC-Pca-100871 Procavia capensis 85.36 2.00e-130 457.00
IUUC-Ppe-101389 Prunus persica 62.14 2.00e-124 438.00
IUUC-Pva-102468 Pteropus vampyrus 85.20 4.00e-151 527.00
IUUC-Pgr-103523 Puccinia graminis 41.47 4.00e-73 268.00
IUUC-Ptt-103930 Puccinia triticina 38.20 4.00e-73 268.00
IUUC-Pte-104299 Pyrenophora teres 48.42 7.00e-94 337.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 49.05 5.00e-94 337.00
IUUC-Rno-105796 Rattus norvegicus 93.75 0.00e+00 682.00
IUUC-Sha-107191 Sarcophilus harrisii 91.97 0.00e+00 638.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 38.26 7.00e-64 237.00
IUUC-Spo-108249 Schizosaccharomyces pombe 43.71 6.00e-81 293.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 47.81 2.00e-94 338.00
IUUC-Sit-110805 Setaria italica 57.81 9.00e-120 423.00
IUUC-Sly-111567 Solanum lycopersicum 61.71 1.00e-125 442.00
IUUC-Stu-112562 Solanum tuberosum 61.71 1.00e-126 445.00
IUUC-Sar-112991 Sorex araneus 98.63 1.00e-120 425.00
IUUC-Sbi-114010 Sorghum bicolor 58.39 5.00e-119 420.00
IUUC-Sre-114947 Sporisorium reilianum 42.99 6.00e-74 270.00
IUUC-Ssc-115371 Sus scrofa 99.44 0.00e+00 657.00
IUUC-Tgu-117429 Taeniopygia guttata 94.46 6.00e-175 606.00
IUUC-Tru-118081 Takifugu rubripes 83.06 3.00e-173 600.00
IUUC-Tsy-119101 Tarsius syrichta 87.43 3.00e-160 557.00
IUUC-Tni-120532 Tetraodon nigroviridis 83.06 4.00e-170 590.00
IUUC-Tca-121373 Theobroma cacao 62.14 5.00e-125 440.00
IUUC-Tre-122050 Trichoderma reesei 45.63 2.00e-90 325.00
IUUC-Tvi-122394 Trichoderma virens 44.82 1.00e-84 306.00
IUUC-Tae-124661 Triticum aestivum 56.18 6.00e-120 423.00
IUUC-Tme-126998 Tuber melanosporum 51.46 4.00e-94 337.00
IUUC-Tbe-128032 Tupaia belangeri 99.16 0.00e+00 661.00
IUUC-Ttr-129102 Tursiops truncatus 88.83 9.00e-161 559.00
IUUC-Uma-129363 Ustilago maydis 43.61 2.00e-77 282.00
IUUC-Vda-129891 Verticillium dahliae 49.21 2.00e-93 335.00
IUUC-Vpa-130827 Vicugna pacos 98.60 0.00e+00 653.00
IUUC-Vvi-131202 Vitis vinifera 59.69 2.00e-123 435.00
IUUC-Xtr-132769 Xenopus tropicalis 85.83 3.00e-171 593.00
IUUC-Xma-133147 Xiphophorus maculatus 82.50 1.00e-168 585.00
IUUC-Yli-134352 Yarrowia lipolytica 33.77 4.00e-36 145.00
IUUC-Zma-135294 Zea mays 58.39 9.00e-119 419.00
Created Date 25-Jun-2017

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