iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126527

Ensembl Protein ID

TRIUR3_05687-P1

UniProt Accession

M7ZKH4; M7ZKH4_TRIUA

Genbank Protein ID

EMS48574.1

Protein Name

Ubiquitin-60S ribosomal protein L40-2

Genbank Nucleotide ID

KD250606

Gene Name

TRIUR3_05687

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_05687	TRIUR3_05687-T1	TRIUR3_05687-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.60e-41	141.1	1	76
ULD/UDP/UBQ/UBQ_PIM	3.90e-28	97.9	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGIIEP SLQALARKYN QEKMICRKCY ARLHPRAVNC RKKKCGHSNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGATCT TCGTCAAGAC CCTGACGGGC AAGACCATCA CGCTCGAGGT CGAGAGCAGC 60
GACACCATCG ACAATGTCAA GGCCAAGATC CAGGACAAGG AGGGTGGGTT ATCTGCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001246	Ailuropoda melanoleuca	91.41	1.00e-66	243.00
IUUC-Atr-003081	Amborella trichopoda	78.29	2.00e-49	186.00
IUUC-Apl-004069	Anas platyrhynchos	90.36	4.00e-41	157.00
IUUC-Ath-007098	Arabidopsis thaliana	97.66	5.00e-71	258.00
IUUC-Ago-007932	Ashbya gossypii	91.41	2.00e-66	243.00
IUUC-Acl-008350	Aspergillus clavatus	85.71	6.00e-63	231.00
IUUC-Afl-008554	Aspergillus flavus	92.19	9.00e-67	244.00
IUUC-Afu-008984	Aspergillus fumigatus	92.19	4.00e-66	241.00
IUUC-Ang-009609	Aspergillus niger	91.41	5.00e-66	241.00
IUUC-Aor-009991	Aspergillus oryzae	90.55	1.00e-64	237.00
IUUC-Ate-010252	Aspergillus terreus	92.00	4.00e-65	241.00
IUUC-Ame-010785	Astyanax mexicanus	90.53	1.00e-48	182.00
IUUC-Bgr-012115	Blumeria graminis	90.48	3.00e-64	236.00
IUUC-Bta-013360	Bos taurus	91.41	1.00e-66	243.00
IUUC-Bci-013851	Botrytis cinerea	92.19	5.00e-67	244.00
IUUC-Bdi-014499	Brachypodium distachyon	100.00	3.00e-73	265.00
IUUC-Bol-015961	Brassica oleracea	98.44	1.00e-71	259.00
IUUC-Cel-018677	Caenorhabditis elegans	88.28	6.00e-63	231.00
IUUC-Cja-019572	Callithrix jacchus	91.41	1.00e-66	243.00
IUUC-Cfa-020339	Canis familiaris	91.41	1.00e-66	243.00
IUUC-Cpo-021534	Cavia porcellus	91.41	1.00e-66	243.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	96.09	4.00e-70	255.00
IUUC-Csa-023398	Chlorocebus sabaeus	91.41	1.00e-66	243.00
IUUC-Cin-025266	Ciona intestinalis	88.28	1.00e-64	236.00
IUUC-Csv-026105	Ciona savignyi	88.19	2.00e-64	236.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	90.40	6.00e-64	238.00
IUUC-Cne-026913	Cryptococcus neoformans	89.84	3.00e-65	239.00
IUUC-Cme-027344	Cyanidioschyzon merolae	92.22	6.00e-45	171.00
IUUC-Dre-028761	Danio rerio	92.19	6.00e-67	244.00
IUUC-Dno-028899	Dasypus novemcinctus	91.41	4.00e-66	241.00
IUUC-Dor-030658	Dipodomys ordii	96.05	8.00e-39	150.00
IUUC-Dme-031588	Drosophila melanogaster	90.62	6.00e-66	241.00
IUUC-Ete-033120	Echinops telfairi	91.41	1.00e-66	243.00
IUUC-Eca-033787	Equus caballus	91.41	1.00e-66	243.00
IUUC-Eeu-035081	Erinaceus europaeus	94.29	2.00e-33	132.00
IUUC-Fca-035725	Felis catus	91.41	1.00e-66	243.00
IUUC-Fox-037870	Fusarium oxysporum	90.62	2.00e-66	242.00
IUUC-Fso-038461	Fusarium solani	96.25	1.00e-41	159.00
IUUC-Gmo-039163	Gadus morhua	91.41	1.00e-66	243.00
IUUC-Ggr-040034	Gaeumannomyces graminis	90.62	2.00e-66	243.00
IUUC-Gga-040909	Gallus gallus	91.41	2.00e-66	243.00
IUUC-Gac-041640	Gasterosteus aculeatus	91.41	1.00e-66	243.00
IUUC-Gma-043254	Glycine max	98.44	5.00e-72	261.00
IUUC-Ggo-045411	Gorilla gorilla	91.41	1.00e-66	243.00
IUUC-Hsa-046609	Homo sapiens	72.26	3.00e-51	192.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	91.41	5.00e-67	246.00
IUUC-Kpa-049279	Komagataella pastoris	89.84	1.00e-65	239.00
IUUC-Lch-049971	Latimeria chalumnae	91.41	2.00e-66	244.00
IUUC-Loc-052117	Lepisosteus oculatus	91.41	1.00e-66	243.00
IUUC-Lma-053049	Leptosphaeria maculans	92.97	2.00e-67	246.00
IUUC-Laf-054284	Loxodonta africana	91.41	5.00e-67	246.00
IUUC-Mcc-055710	Macaca mulatta	90.00	2.00e-65	241.00
IUUC-Meu-056411	Macropus eugenii	91.41	1.00e-66	243.00
IUUC-Mor-057008	Magnaporthe oryzae	90.62	9.00e-66	240.00
IUUC-Mpo-057360	Magnaporthe poae	92.19	5.00e-67	244.00
IUUC-Mtr-058437	Medicago truncatula	97.66	7.00e-71	257.00
IUUC-Mla-059080	Melampsora laricipopulina	91.26	1.00e-50	190.00
IUUC-Mmr-061335	Microcebus murinus	85.94	3.00e-60	222.00
IUUC-Mdo-062752	Monodelphis domestica	91.41	1.00e-66	243.00
IUUC-Mmu-063548	Mus musculus	91.41	5.00e-67	246.00
IUUC-Mac-064915	Musa acuminata	99.22	4.00e-72	261.00
IUUC-Mpu-066513	Mustela putorius furo	91.41	1.00e-66	243.00
IUUC-Mlu-068010	Myotis lucifugus	89.06	4.00e-65	238.00
IUUC-Nfi-068358	Neosartorya fischeri	92.06	3.00e-65	239.00
IUUC-Ncr-068799	Neurospora crassa	90.62	6.00e-66	241.00
IUUC-Opr-070655	Ochotona princeps	91.41	1.00e-66	243.00
IUUC-Ont-072180	Oreochromis niloticus	92.06	1.00e-65	240.00
IUUC-Oan-073196	Ornithorhynchus anatinus	91.41	1.00e-66	243.00
IUUC-Oba-075092	Oryza barthii	99.22	8.00e-73	264.00
IUUC-Obr-076156	Oryza brachyantha	99.22	5.00e-73	265.00
IUUC-Ogl-077471	Oryza glaberrima	99.22	8.00e-73	264.00
IUUC-Ogu-078259	Oryza glumaepatula	99.22	8.00e-73	264.00
IUUC-Oin-079901	Oryza indica	99.22	8.00e-73	264.00
IUUC-Ome-081343	Oryza meridionalis	99.22	8.00e-73	264.00
IUUC-Oru-085252	Oryza rufipogon	99.22	8.00e-73	264.00
IUUC-Ola-086333	Oryzias latipes	90.62	3.00e-66	242.00
IUUC-Olu-087819	Ostreococcus lucimarinus	84.38	2.00e-61	226.00
IUUC-Oga-088027	Otolemur garnettii	91.41	1.00e-66	243.00
IUUC-Oar-090419	Ovis aries	91.41	1.00e-66	243.00
IUUC-Ptr-091593	Pan troglodytes	91.41	1.00e-66	243.00
IUUC-Pan-091806	Papio anubis	89.84	3.00e-65	238.00
IUUC-Psi-093654	Pelodiscus sinensis	91.41	1.00e-66	243.00
IUUC-Ppa-095174	Physcomitrella patens	98.44	2.00e-71	259.00
IUUC-Pfo-096492	Poecilia formosa	91.41	2.00e-66	243.00
IUUC-Pab-098004	Pongo abelii	91.41	1.00e-66	243.00
IUUC-Pop-098929	Populus trichocarpa	99.22	4.00e-72	261.00
IUUC-Ppe-101497	Prunus persica	97.66	2.00e-71	259.00
IUUC-Pva-102945	Pteropus vampyrus	91.41	1.00e-66	243.00
IUUC-Pgr-103268	Puccinia graminis	91.41	8.00e-67	245.00
IUUC-Ptt-103804	Puccinia triticina	94.06	8.00e-53	197.00
IUUC-Pte-104101	Pyrenophora teres	91.41	7.00e-67	244.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	91.41	2.00e-66	243.00
IUUC-Rno-105290	Rattus norvegicus	91.41	1.00e-66	243.00
IUUC-Sce-106249	Saccharomyces cerevisiae	89.84	9.00e-66	240.00
IUUC-Sha-106570	Sarcophilus harrisii	91.41	1.00e-66	243.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	92.97	2.00e-67	246.00
IUUC-Spo-108045	Schizosaccharomyces pombe	92.19	1.00e-66	243.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	92.97	2.00e-67	246.00
IUUC-Sit-110085	Setaria italica	96.03	2.00e-70	257.00
IUUC-Sly-111884	Solanum lycopersicum	99.22	4.00e-72	261.00
IUUC-Stu-112385	Solanum tuberosum	95.28	8.00e-68	247.00
IUUC-Sar-112942	Sorex araneus	91.41	1.00e-66	243.00
IUUC-Sbi-114790	Sorghum bicolor	98.45	4.00e-72	261.00
IUUC-Sre-114908	Sporisorium reilianum	90.62	4.00e-65	238.00
IUUC-Ssc-116417	Sus scrofa	91.41	1.00e-66	243.00
IUUC-Tru-117557	Takifugu rubripes	91.41	2.00e-66	243.00
IUUC-Tni-119715	Tetraodon nigroviridis	91.41	2.00e-66	243.00
IUUC-Tca-121404	Theobroma cacao	98.44	1.00e-71	260.00
IUUC-Tvi-122611	Trichoderma virens	89.06	1.00e-65	240.00
IUUC-Tae-125373	Triticum aestivum	81.65	2.00e-68	250.00
IUUC-Tme-127138	Tuber melanosporum	92.80	4.00e-66	242.00
IUUC-Tbe-127851	Tupaia belangeri	96.05	5.00e-39	151.00
IUUC-Ttr-128939	Tursiops truncatus	91.41	1.00e-66	243.00
IUUC-Uma-129619	Ustilago maydis	90.62	4.00e-65	238.00
IUUC-Vda-129775	Verticillium dahliae	88.89	9.00e-64	234.00
IUUC-Vvi-131414	Vitis vinifera	98.44	1.00e-71	259.00
IUUC-Xtr-131921	Xenopus tropicalis	91.41	1.00e-66	243.00
IUUC-Xma-134071	Xiphophorus maculatus	91.41	2.00e-66	243.00
IUUC-Yli-134671	Yarrowia lipolytica	92.19	1.00e-66	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence