iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022663

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496139

Gene Name

CHLREDRAFT_58437

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_58437	EDP00413	EDP00413

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.60e-52	176.8	285	459
ULD/UDP/UBQ/UBQ_Other	3.90e-08	32.6	4	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 221  lklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqke............................................... 274
           + l++lP++L+l+++Rf f+++++++ ki kk+ f le+d  +fc++  +kq e                                               
   Q: 285  TALTELPPYLTLQMMRFFFRRDNQQKAKILKKIPFSLEFDAYEFCSDALKKQLEgprqafkeaqdaameakklakkvlphlphlpftpapqpgprptssqp 385
           6799*******************************************555555566666777777777777777888888888888888888888888888 PP
   S: 275  ......kkkYeLiavvvHsG.slssGHYvayvknekgk.WllfdDskVtevkeeevleetg....staYvlfYk 336
                 + kYeL++vv H+G +++sGHYva+vk+ +++ W++fdD+k t  +eeevl+ +g    + aY+l+Y+
   Q: 386  apprphTGKYELVGVVTHKGrTADSGHYVAWVKQPSDGtWVCFDDEKLTIRSEEEVLQLSGggdwHMAYLLLYR 459
           899999****************************76666*******************988************8 PP

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           v++ vk+ + s  +++v+ s + +++K +i+ ++g+p+e+q+ ++kG  L+dd +++    kdg+ti+l+ +
   Q: 4    VKLNVKWGKESFNDIEVDLSQPPLVFKAQIFALTGVPVERQKVLLKGAQLKDD-DWGKAAPKDGMTIMLMGS 74
           5788999****88*************************************999.999999********9976 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MTTVKLNVKW GKESFNDIEV DLSQPPLVFK AQIFALTGVP VERQKVLLKG AQLKDDDWGK 60
AAPKDGMTIM LMGSAEAVSV EAPKNAPKFV EDLPEQEQEH LDTKRFGAGL HNLGNTCYMN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCACCG TCAAACTAAA TGTCAAGTGG GGCAAAGAGT CATTTAATGA CATTGAGGTG 60
GATCTGTCCC AGCCGCCCCT AGTTTTTAAG GCCCAAATAT TTGCCCTGAC CGGTGTGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cre:CHLREDRAFT_58437

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	35.47	5.00e-46	177.00
IUUC-Aml-002053	Ailuropoda melanoleuca	36.82	2.00e-89	320.00
IUUC-Atr-002725	Amborella trichopoda	44.40	3.00e-103	367.00
IUUC-Apl-004031	Anas platyrhynchos	38.24	2.00e-93	334.00
IUUC-Aca-004361	Anolis carolinensis	38.23	1.00e-91	328.00
IUUC-Aly-006176	Arabidopsis lyrata	42.92	1.00e-105	374.00
IUUC-Ath-007658	Arabidopsis thaliana	43.36	1.00e-109	388.00
IUUC-Ago-007796	Ashbya gossypii	29.98	2.00e-52	198.00
IUUC-Acl-008258	Aspergillus clavatus	35.26	2.00e-52	198.00
IUUC-Afl-008732	Aspergillus flavus	35.22	1.00e-55	209.00
IUUC-Afu-008755	Aspergillus fumigatus	34.45	4.00e-54	204.00
IUUC-Ani-009148	Aspergillus nidulans	36.71	3.00e-56	211.00
IUUC-Ang-009878	Aspergillus niger	35.57	1.00e-54	205.00
IUUC-Aor-010239	Aspergillus oryzae	35.22	1.00e-55	209.00
IUUC-Ate-010243	Aspergillus terreus	35.68	2.00e-55	208.00
IUUC-Ame-011327	Astyanax mexicanus	31.98	5.00e-26	110.00
IUUC-Bgr-012231	Blumeria graminis	34.04	7.00e-54	203.00
IUUC-Bta-012553	Bos taurus	37.53	1.00e-91	328.00
IUUC-Bci-013606	Botrytis cinerea	35.09	6.00e-57	213.00
IUUC-Bdi-014567	Brachypodium distachyon	44.82	6.00e-113	399.00
IUUC-Bol-015565	Brassica oleracea	44.19	3.00e-108	384.00
IUUC-Bra-017297	Brassica rapa	43.60	2.00e-107	380.00
IUUC-Cel-018140	Caenorhabditis elegans	36.25	6.00e-78	283.00
IUUC-Cja-019516	Callithrix jacchus	37.33	7.00e-90	322.00
IUUC-Cfa-020808	Canis familiaris	37.83	3.00e-92	330.00
IUUC-Cpo-021688	Cavia porcellus	37.55	1.00e-88	318.00
IUUC-Csa-023429	Chlorocebus sabaeus	36.92	3.00e-89	320.00
IUUC-Cho-024347	Choloepus hoffmanni	37.83	8.00e-92	329.00
IUUC-Cin-025198	Ciona intestinalis	34.88	2.00e-70	258.00
IUUC-Csv-026007	Ciona savignyi	35.64	2.00e-75	274.00
IUUC-Cgl-026757	Colletotrichum gloeosporioides	38.08	2.00e-53	201.00
IUUC-Cne-026963	Cryptococcus neoformans	31.52	6.00e-59	219.00
IUUC-Cme-027240	Cyanidioschyzon merolae	31.59	5.00e-58	216.00
IUUC-Dre-027647	Danio rerio	37.95	2.00e-94	337.00
IUUC-Dno-029967	Dasypus novemcinctus	36.82	2.00e-88	318.00
IUUC-Dor-030886	Dipodomys ordii	32.27	9.00e-60	222.00
IUUC-Dse-031466	Dothistroma septosporum	33.51	4.00e-48	184.00
IUUC-Dme-032079	Drosophila melanogaster	36.34	5.00e-81	293.00
IUUC-Ete-032351	Echinops telfairi	38.36	1.00e-85	308.00
IUUC-Eca-033461	Equus caballus	38.08	8.00e-93	332.00
IUUC-Eeu-035220	Erinaceus europaeus	31.29	1.00e-56	212.00
IUUC-Fca-036210	Felis catus	37.83	3.00e-92	330.00
IUUC-Fal-037528	Ficedula albicollis	38.45	6.00e-91	326.00
IUUC-Fox-037805	Fusarium oxysporum	39.02	1.00e-61	229.00
IUUC-Fso-038177	Fusarium solani	37.47	4.00e-60	223.00
IUUC-Gmo-038953	Gadus morhua	38.49	1.00e-89	321.00
IUUC-Ggr-039972	Gaeumannomyces graminis	36.94	8.00e-53	199.00
IUUC-Gga-040462	Gallus gallus	38.76	2.00e-93	334.00
IUUC-Gac-041312	Gasterosteus aculeatus	38.66	8.00e-96	342.00
IUUC-Gma-043255	Glycine max	42.20	1.00e-105	374.00
IUUC-Ggo-045458	Gorilla gorilla	35.08	1.00e-66	245.00
IUUC-Hsa-045706	Homo sapiens	36.92	3.00e-89	320.00
IUUC-Hvu-047821	Hordeum vulgare	50.00	2.00e-54	203.00
IUUC-Itr-048654	Ictidomys tridecemlineatus	37.47	2.00e-91	327.00
IUUC-Lch-050464	Latimeria chalumnae	37.32	4.00e-90	323.00
IUUC-Lpe-051419	Leersia perrieri	44.73	2.00e-110	390.00
IUUC-Loc-052732	Lepisosteus oculatus	38.46	2.00e-94	337.00
IUUC-Lma-053177	Leptosphaeria maculans	37.70	3.00e-60	224.00
IUUC-Laf-053822	Loxodonta africana	37.53	3.00e-92	330.00
IUUC-Mcc-055893	Macaca mulatta	36.92	3.00e-89	320.00
IUUC-Meu-056307	Macropus eugenii	36.01	1.00e-84	305.00
IUUC-Mor-057171	Magnaporthe oryzae	35.71	4.00e-56	210.00
IUUC-Mpo-057415	Magnaporthe poae	37.34	4.00e-55	207.00
IUUC-Mtr-057901	Medicago truncatula	42.32	3.00e-107	380.00
IUUC-Mla-058897	Melampsora laricipopulina	35.94	2.00e-51	194.00
IUUC-Mga-060016	Meleagris gallopavo	39.23	5.00e-93	332.00
IUUC-Mvi-060562	Microbotryum violaceum	32.49	3.00e-43	167.00
IUUC-Mmr-060624	Microcebus murinus	38.26	2.00e-92	330.00
IUUC-Mdo-061809	Monodelphis domestica	37.30	6.00e-90	322.00
IUUC-Mmu-063869	Mus musculus	38.03	9.00e-91	325.00
IUUC-Mac-064876	Musa acuminata	42.83	8.00e-100	355.00
IUUC-Mpu-066480	Mustela putorius furo	37.83	2.00e-92	331.00
IUUC-Mlu-067866	Myotis lucifugus	37.63	1.00e-92	331.00
IUUC-Nfi-068393	Neosartorya fischeri	33.93	5.00e-53	200.00
IUUC-Ncr-068815	Neurospora crassa	33.21	5.00e-66	243.00
IUUC-Nle-070121	Nomascus leucogenys	45.25	3.00e-50	189.00
IUUC-Opr-070712	Ochotona princeps	30.63	3.00e-41	161.00
IUUC-Ont-071544	Oreochromis niloticus	36.29	9.00e-83	298.00
IUUC-Oan-073635	Ornithorhynchus anatinus	35.65	1.00e-63	234.00
IUUC-Ocu-074926	Oryctolagus cuniculus	37.40	1.00e-89	322.00
IUUC-Oba-075633	Oryza barthii	45.03	8.00e-110	388.00
IUUC-Obr-076423	Oryza brachyantha	45.26	6.00e-111	392.00
IUUC-Ogl-077913	Oryza glaberrima	45.26	8.00e-114	402.00
IUUC-Ogu-078435	Oryza glumaepatula	45.03	8.00e-110	388.00
IUUC-Oin-080072	Oryza indica	45.03	5.00e-110	389.00
IUUC-Olo-080535	Oryza longistaminata	43.52	4.00e-101	359.00
IUUC-Ome-081309	Oryza meridionalis	45.03	8.00e-110	388.00
IUUC-Oni-083113	Oryza nivara	45.03	8.00e-110	388.00
IUUC-Opu-083168	Oryza punctata	43.86	1.00e-104	371.00
IUUC-Oru-084253	Oryza rufipogon	45.03	8.00e-110	388.00
IUUC-Osa-085554	Oryza sativa	45.26	1.00e-113	401.00
IUUC-Ola-086998	Oryzias latipes	37.15	3.00e-89	320.00
IUUC-Olu-087818	Ostreococcus lucimarinus	40.00	1.00e-85	308.00
IUUC-Oga-088571	Otolemur garnettii	37.80	2.00e-91	327.00
IUUC-Oar-089526	Ovis aries	37.70	3.00e-91	327.00
IUUC-Ptr-091433	Pan troglodytes	36.92	3.00e-89	320.00
IUUC-Pan-091966	Papio anubis	36.92	3.00e-89	320.00
IUUC-Psi-093458	Pelodiscus sinensis	38.00	4.00e-83	300.00
IUUC-Pma-094343	Petromyzon marinus	46.01	3.00e-51	193.00
IUUC-Pno-095109	Phaeosphaeria nodorum	36.04	3.00e-56	211.00
IUUC-Ppa-095756	Physcomitrella patens	42.77	1.00e-101	361.00
IUUC-Pfo-096514	Poecilia formosa	37.30	7.00e-83	299.00
IUUC-Pab-098477	Pongo abelii	31.85	4.00e-63	233.00
IUUC-Pop-099221	Populus trichocarpa	42.95	8.00e-105	372.00
IUUC-Pca-100791	Procavia capensis	30.09	1.00e-50	192.00
IUUC-Ppe-101812	Prunus persica	41.08	4.00e-101	359.00
IUUC-Pva-102462	Pteropus vampyrus	33.72	2.00e-67	247.00
IUUC-Pgr-103623	Puccinia graminis	40.06	1.00e-55	209.00
IUUC-Ptt-103767	Puccinia triticina	38.56	2.00e-49	188.00
IUUC-Pte-104109	Pyrenophora teres	37.90	3.00e-59	221.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	37.37	8.00e-60	223.00
IUUC-Rno-105351	Rattus norvegicus	38.23	8.00e-89	318.00
IUUC-Sce-106168	Saccharomyces cerevisiae	27.10	7.00e-50	189.00
IUUC-Sha-107491	Sarcophilus harrisii	37.35	6.00e-91	326.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	30.74	8.00e-63	232.00
IUUC-Spo-108174	Schizosaccharomyces pombe	32.29	1.00e-57	215.00
IUUC-Ssl-108659	Sclerotinia sclerotiorum	36.34	9.00e-58	216.00
IUUC-Smo-109276	Selaginella moellendorffii	44.44	3.00e-111	393.00
IUUC-Sit-110361	Setaria italica	45.36	1.00e-113	401.00
IUUC-Sly-110965	Solanum lycopersicum	43.48	1.00e-108	384.00
IUUC-Sar-113355	Sorex araneus	32.81	4.00e-42	163.00
IUUC-Sbi-114778	Sorghum bicolor	46.30	8.00e-114	402.00
IUUC-Sre-115011	Sporisorium reilianum	34.96	9.00e-52	196.00
IUUC-Ssc-116273	Sus scrofa	37.80	1.00e-89	322.00
IUUC-Tgu-117063	Taeniopygia guttata	38.45	4.00e-91	326.00
IUUC-Tru-118381	Takifugu rubripes	37.68	3.00e-88	317.00
IUUC-Tsy-119076	Tarsius syrichta	39.66	1.00e-35	142.00
IUUC-Tni-119941	Tetraodon nigroviridis	37.17	4.00e-83	300.00
IUUC-Tca-121246	Theobroma cacao	43.27	6.00e-108	382.00
IUUC-Tre-121969	Trichoderma reesei	36.66	1.00e-53	202.00
IUUC-Tvi-122543	Trichoderma virens	35.92	9.00e-53	199.00
IUUC-Tae-125484	Triticum aestivum	45.13	1.00e-110	391.00
IUUC-Tur-126128	Triticum urartu	37.01	1.00e-46	178.00
IUUC-Tbe-128030	Tupaia belangeri	33.88	4.00e-77	280.00
IUUC-Ttr-128701	Tursiops truncatus	33.33	7.00e-63	232.00
IUUC-Uma-129657	Ustilago maydis	35.85	1.00e-53	202.00
IUUC-Vda-129723	Verticillium dahliae	35.64	7.00e-54	202.00
IUUC-Vpa-130284	Vicugna pacos	28.63	3.00e-47	181.00
IUUC-Vvi-131037	Vitis vinifera	43.24	3.00e-107	380.00
IUUC-Xtr-132235	Xenopus tropicalis	39.44	2.00e-95	340.00
IUUC-Xma-133840	Xiphophorus maculatus	37.10	2.00e-88	317.00
IUUC-Yli-134453	Yarrowia lipolytica	36.16	1.00e-69	255.00
IUUC-Zma-135791	Zea mays	42.36	4.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence