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Tag Content
UUCD2 ID IUUC-Dre-027999
UUCD1 version UUC-DaR-01024
Ensembl Protein ID ENSDARP00000100101.1
UniProt Accession F1RCK2; F1RCK2_DANRE
Genbank Protein ID ENSDARP00000100101
Protein Name E3 ubiquitin-protein ligase synoviolin
Genbank Nucleotide ID BX323077
Gene Name syvn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000017842.9 ENSDART00000111860.1 ENSDARP00000100101.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.80e-09 37.2 291 330
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +g + lpC+H+fh +Cl  w       +++++CP+Cr
   Q: 291  CIICREEMVTGAKKLPCNHIFHSSCLRSW------FQRQQTCPTCR 330
           ********9*9******************......**********8 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MVRAALVTAT SLALTGAVVA HAYFLKHQFY PTVVYLTKSS PSMAVLYIQA FVLVFLLGKL 60
MRKVFFGQLR AAEMEHLIER SWYAVTETCL AFTVFRDDFS PRFVALFTLL LFLKCFHWLA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-027999|E3,RING|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGCGAAAAAT AAACACGTAT CGTCAAGTGG CCGCGACTAC AACAGATTGG AAGCGACAAG 60
ACTGCTTTAG ATGGAAGGAT TGAGTCGAGG CGCAGTTATT AAAAGCTAAA CGCAATAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-027999|E3,RING|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030433--P:ubiquitin-dependent ERAD pathway
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000344 Aegilops tauschii 37.28 9.00e-53 201.00
IUUC-Aml-001539 Ailuropoda melanoleuca 91.69 0.00e+00 659.00
IUUC-Atr-002892 Amborella trichopoda 42.69 3.00e-77 283.00
IUUC-Apl-004003 Anas platyrhynchos 93.22 5.00e-64 235.00
IUUC-Aca-004799 Anolis carolinensis 92.81 0.00e+00 640.00
IUUC-Aly-006352 Arabidopsis lyrata 42.99 5.00e-75 275.00
IUUC-Ath-006773 Arabidopsis thaliana 42.99 7.00e-75 274.00
IUUC-Ago-007894 Ashbya gossypii 25.72 4.00e-19 89.70
IUUC-Acl-008041 Aspergillus clavatus 30.96 3.00e-56 213.00
IUUC-Afl-008427 Aspergillus flavus 31.01 2.00e-51 197.00
IUUC-Afu-009023 Aspergillus fumigatus 31.27 1.00e-57 218.00
IUUC-Ani-009133 Aspergillus nidulans 30.67 5.00e-58 219.00
IUUC-Ang-009612 Aspergillus niger 33.43 7.00e-56 212.00
IUUC-Aor-010045 Aspergillus oryzae 30.37 2.00e-57 217.00
IUUC-Ate-010533 Aspergillus terreus 33.16 1.00e-57 218.00
IUUC-Ame-011083 Astyanax mexicanus 98.22 0.00e+00 664.00
IUUC-Bgr-012122 Blumeria graminis 30.81 5.00e-26 113.00
IUUC-Bta-013375 Bos taurus 91.64 0.00e+00 656.00
IUUC-Bci-013675 Botrytis cinerea 28.02 2.00e-43 171.00
IUUC-Bdi-015070 Brachypodium distachyon 42.69 2.00e-70 259.00
IUUC-Bol-015674 Brassica oleracea 42.39 1.00e-74 274.00
IUUC-Bra-017516 Brassica rapa 41.69 8.00e-74 271.00
IUUC-Cel-018422 Caenorhabditis elegans 57.49 6.00e-117 414.00
IUUC-Cja-019779 Callithrix jacchus 89.05 6.00e-180 624.00
IUUC-Cfa-020189 Canis familiaris 91.64 0.00e+00 657.00
IUUC-Cpo-022209 Cavia porcellus 91.39 0.00e+00 656.00
IUUC-Cre-022743 Chlamydomonas reinhardtii 38.61 3.00e-64 238.00
IUUC-Csa-023571 Chlorocebus sabaeus 91.64 0.00e+00 657.00
IUUC-Cho-024889 Choloepus hoffmanni 82.79 5.00e-168 584.00
IUUC-Csv-026160 Ciona savignyi 62.36 1.00e-125 443.00
IUUC-Cne-027002 Cryptococcus neoformans 39.56 2.00e-76 280.00
IUUC-Cme-027285 Cyanidioschyzon merolae 36.68 1.00e-49 191.00
IUUC-Dno-029250 Dasypus novemcinctus 91.39 0.00e+00 658.00
IUUC-Dor-030718 Dipodomys ordii 87.24 1.00e-179 623.00
IUUC-Dse-031498 Dothistroma septosporum 34.15 1.00e-26 115.00
IUUC-Dme-031969 Drosophila melanogaster 63.80 1.00e-141 496.00
IUUC-Ete-032592 Echinops telfairi 83.08 1.00e-26 114.00
IUUC-Eca-033258 Equus caballus 91.69 0.00e+00 659.00
IUUC-Fca-035980 Felis catus 91.96 0.00e+00 661.00
IUUC-Fal-037554 Ficedula albicollis 65.74 1.00e-95 343.00
IUUC-Fox-037902 Fusarium oxysporum 30.77 3.00e-52 200.00
IUUC-Fso-038418 Fusarium solani 30.42 7.00e-50 192.00
IUUC-Gmo-039288 Gadus morhua 97.26 0.00e+00 667.00
IUUC-Ggr-040076 Gaeumannomyces graminis 32.18 8.00e-50 192.00
IUUC-Gga-040347 Gallus gallus 88.81 8.00e-73 265.00
IUUC-Gac-042347 Gasterosteus aculeatus 96.21 0.00e+00 653.00
IUUC-Gma-044123 Glycine max 44.31 1.00e-73 271.00
IUUC-Ggo-044858 Gorilla gorilla 91.69 0.00e+00 659.00
IUUC-Hsa-046412 Homo sapiens 91.69 0.00e+00 659.00
IUUC-Hvu-047279 Hordeum vulgare 42.69 3.00e-70 258.00
IUUC-Itr-048924 Ictidomys tridecemlineatus 91.64 0.00e+00 655.00
IUUC-Kpa-049117 Komagataella pastoris 28.44 4.00e-29 122.00
IUUC-Lch-049533 Latimeria chalumnae 48.85 1.00e-73 270.00
IUUC-Lpe-051229 Leersia perrieri 34.29 3.00e-35 142.00
IUUC-Loc-052843 Lepisosteus oculatus 95.37 5.00e-126 443.00
IUUC-Lma-052997 Leptosphaeria maculans 32.55 2.00e-60 227.00
IUUC-Laf-053482 Loxodonta africana 91.64 0.00e+00 654.00
IUUC-Mcc-055075 Macaca mulatta 91.69 0.00e+00 660.00
IUUC-Meu-056683 Macropus eugenii 92.75 2.00e-144 505.00
IUUC-Mor-057082 Magnaporthe oryzae 31.84 6.00e-56 212.00
IUUC-Mpo-057573 Magnaporthe poae 31.27 9.00e-51 194.00
IUUC-Mtr-058601 Medicago truncatula 42.69 5.00e-78 285.00
IUUC-Mla-059168 Melampsora laricipopulina 39.12 1.00e-74 275.00
IUUC-Mga-059510 Meleagris gallopavo 93.98 4.00e-45 174.00
IUUC-Mvi-060515 Microbotryum violaceum 41.04 6.00e-65 242.00
IUUC-Mmr-060922 Microcebus murinus 91.69 0.00e+00 658.00
IUUC-Mdo-062491 Monodelphis domestica 91.99 0.00e+00 640.00
IUUC-Mmu-063770 Mus musculus 91.67 0.00e+00 656.00
IUUC-Mac-064789 Musa acuminata 42.99 5.00e-80 291.00
IUUC-Mpu-066107 Mustela putorius furo 91.20 0.00e+00 661.00
IUUC-Mlu-067918 Myotis lucifugus 91.64 6.00e-175 607.00
IUUC-Nfi-068389 Neosartorya fischeri 31.01 6.00e-57 216.00
IUUC-Ncr-068742 Neurospora crassa 34.15 3.00e-52 200.00
IUUC-Nle-069139 Nomascus leucogenys 91.69 0.00e+00 659.00
IUUC-Opr-070898 Ochotona princeps 89.42 3.00e-115 409.00
IUUC-Ont-071991 Oreochromis niloticus 95.74 0.00e+00 673.00
IUUC-Ocu-074065 Oryctolagus cuniculus 91.69 0.00e+00 657.00
IUUC-Oba-075221 Oryza barthii 41.49 3.00e-68 252.00
IUUC-Obr-076914 Oryza brachyantha 43.23 7.00e-65 241.00
IUUC-Ogu-078124 Oryza glumaepatula 41.49 3.00e-68 252.00
IUUC-Oin-080013 Oryza indica 39.52 3.00e-64 239.00
IUUC-Olo-080247 Oryza longistaminata 39.56 3.00e-60 225.00
IUUC-Ome-081769 Oryza meridionalis 42.39 2.00e-71 263.00
IUUC-Oni-082946 Oryza nivara 41.49 3.00e-68 253.00
IUUC-Opu-083268 Oryza punctata 36.89 3.00e-51 196.00
IUUC-Oru-085114 Oryza rufipogon 41.49 3.00e-68 252.00
IUUC-Osa-085829 Oryza sativa 42.09 6.00e-71 261.00
IUUC-Ola-087449 Oryzias latipes 97.01 0.00e+00 654.00
IUUC-Olu-087894 Ostreococcus lucimarinus 42.17 1.00e-72 266.00
IUUC-Oga-089036 Otolemur garnettii 91.64 0.00e+00 656.00
IUUC-Oar-089715 Ovis aries 91.69 0.00e+00 659.00
IUUC-Ptr-091000 Pan troglodytes 91.64 0.00e+00 654.00
IUUC-Pan-092187 Papio anubis 91.69 0.00e+00 660.00
IUUC-Psi-093377 Pelodiscus sinensis 93.33 4.00e-174 604.00
IUUC-Pma-094759 Petromyzon marinus 93.53 2.00e-79 289.00
IUUC-Pno-094883 Phaeosphaeria nodorum 32.35 6.00e-58 219.00
IUUC-Ppa-095684 Physcomitrella patens 44.20 8.00e-72 264.00
IUUC-Pfo-096861 Poecilia formosa 95.85 0.00e+00 669.00
IUUC-Pab-098030 Pongo abelii 91.69 0.00e+00 659.00
IUUC-Pop-099245 Populus trichocarpa 42.17 3.00e-79 289.00
IUUC-Pca-100191 Procavia capensis 87.72 0.00e+00 631.00
IUUC-Ppe-101829 Prunus persica 43.50 2.00e-80 293.00
IUUC-Pva-102689 Pteropus vampyrus 91.69 0.00e+00 660.00
IUUC-Pgr-103286 Puccinia graminis 37.02 5.00e-71 262.00
IUUC-Ptt-103919 Puccinia triticina 36.54 1.00e-68 254.00
IUUC-Pte-104372 Pyrenophora teres 32.75 2.00e-63 237.00
IUUC-Pyt-104456 Pyrenophora triticirepentis 32.49 4.00e-61 229.00
IUUC-Rno-105723 Rattus norvegicus 91.64 0.00e+00 655.00
IUUC-Sce-106348 Saccharomyces cerevisiae 26.25 3.00e-24 106.00
IUUC-Sha-107300 Sarcophilus harrisii 91.42 2.00e-146 512.00
IUUC-Sja-107685 Schizosaccharomyces japonicus 28.13 3.00e-38 152.00
IUUC-Spo-108308 Schizosaccharomyces pombe 28.57 3.00e-37 150.00
IUUC-Ssl-108558 Sclerotinia sclerotiorum 29.70 1.00e-41 165.00
IUUC-Smo-109123 Selaginella moellendorffii 45.74 7.00e-76 277.00
IUUC-Sit-110276 Setaria italica 42.39 1.00e-71 263.00
IUUC-Sly-111819 Solanum lycopersicum 43.89 2.00e-72 266.00
IUUC-Stu-112048 Solanum tuberosum 42.22 4.00e-75 275.00
IUUC-Sbi-114192 Sorghum bicolor 43.59 2.00e-68 253.00
IUUC-Sre-115212 Sporisorium reilianum 37.65 2.00e-64 240.00
IUUC-Ssc-116323 Sus scrofa 91.34 0.00e+00 652.00
IUUC-Tgu-117156 Taeniopygia guttata 89.61 4.00e-38 148.00
IUUC-Tru-118045 Takifugu rubripes 94.93 0.00e+00 670.00
IUUC-Tsy-118823 Tarsius syrichta 79.62 6.00e-149 520.00
IUUC-Tni-120106 Tetraodon nigroviridis 94.47 1.00e-134 473.00
IUUC-Tca-121462 Theobroma cacao 44.78 9.00e-79 287.00
IUUC-Tre-122204 Trichoderma reesei 40.40 2.00e-28 121.00
IUUC-Tvi-122550 Trichoderma virens 30.77 7.00e-52 199.00
IUUC-Tae-125239 Triticum aestivum 43.28 1.00e-72 266.00
IUUC-Tur-126538 Triticum urartu 38.01 2.00e-50 194.00
IUUC-Tme-127197 Tuber melanosporum 39.04 9.00e-66 245.00
IUUC-Tbe-127385 Tupaia belangeri 76.88 3.00e-168 585.00
IUUC-Ttr-128795 Tursiops truncatus 91.69 0.00e+00 659.00
IUUC-Uma-129401 Ustilago maydis 36.72 3.00e-54 206.00
IUUC-Vda-129968 Verticillium dahliae 29.21 1.00e-44 175.00
IUUC-Vvi-130944 Vitis vinifera 44.71 9.00e-80 291.00
IUUC-Xtr-131884 Xenopus tropicalis 89.88 0.00e+00 631.00
IUUC-Xma-133488 Xiphophorus maculatus 96.14 0.00e+00 672.00
IUUC-Yli-134552 Yarrowia lipolytica 26.84 3.00e-37 149.00
IUUC-Zma-135530 Zea mays 43.91 7.00e-69 254.00
Created Date 25-Jun-2017

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