iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043939

UUCD1 version

UUC-GlM-01576

Ensembl Protein ID

GLYMA12G02900.2

UniProt Accession

K7LSP6; K7LSP6_SOYBN

Genbank Protein ID

KRH24169.1; KRH24170.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845; CM000845

Gene Name

LOC100777451; GLYMA_12G025800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G02900	GLYMA12G02900.2	GLYMA12G02900.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-19	70.5	93	127
UBD/Beta-Prp	2.90e-48	166.2	11	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcl.afsdtllvsGsdDgtikvWDlrtgvl 35
           H++ v+ l ++++ +++sG dDg ikvWD+r+  +
   Q: 93   HESAVNRLiNLTESTVASGDDDGCIKVWDTRERSC 127
           8888888624644689*************987655 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghedsvlslsfsp 104
           +++f+p+++l+a+g  +g + ++++++ ++   l ++  h++  +a +f++ g  l+tgs D  ++ + d++tg+++  + +  +s++   ++ 
   Q: 11   DIDFHPSDNLVAAGLITGHLHLYRYSPHTVpvrLLEVHAHTESCRAARFINGGRALLTGSPDcSILAI-DVETGSTIARVDNAHESAVNRLINL 103
           589************************999877888899999********************667777.************8888888877888 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           + ++++sG++d  i+vwd+++++c +  +++h++ ++ +++ +d+  l + s D+t+ + +l+++++  + +   +d   s+ + +ng+ +v g
   Q: 104  TESTVASGDDDGCIKVWDTRERSCCN-SFNVHEDYISDITFASDAMKLLATSGDGTLSVCNLRRNTVQARSEF-SEDELLSVVLMKNGRKVVCG 195
           89************************.******************88888899******************99.******************** PP
   S: 199  sldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
           s+ g + l++    ++c +++++ ++n  +  +  +++r+++gs+ g i+
   Q: 196  SQTGIILLYSWGcFKDCSDRFTDLSSNSIDAMLKLDEDRIITGSENGIIN 245
           ************9999*******888888888888***********9997 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEISLGKLAF DIDFHPSDNL VAAGLITGHL HLYRYSPHTV PVRLLEVHAH TESCRAARFI 60
NGGRALLTGS PDCSILAIDV ETGSTIARVD NAHESAVNRL INLTESTVAS GDDDGCIKVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTAATCTAC TTTGCATTGC TAAACAGGTG GAAGAATGGA GATAAGTTTG GGGAAACTTG 60
CATTTGACAT TGATTTTCAT CCCTCAGATA ATCTTGTTGC CGCCGGTCTA ATTACCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

gmx:100777451

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008723	Aspergillus flavus	24.85	2.00e-15	76.60
IUUC-Cin-025565	Ciona intestinalis	34.38	1.00e-44	173.00
IUUC-Cne-026979	Cryptococcus neoformans	36.86	4.00e-47	181.00
IUUC-Cme-027192	Cyanidioschyzon merolae	32.66	7.00e-22	98.20
IUUC-Dse-031203	Dothistroma septosporum	22.84	9.00e-13	68.20
IUUC-Ggr-039978	Gaeumannomyces graminis	23.73	1.00e-16	80.50
IUUC-Gac-041313	Gasterosteus aculeatus	37.94	6.00e-57	214.00
IUUC-Kpa-049408	Komagataella pastoris	23.89	2.00e-11	63.50
IUUC-Lch-050331	Latimeria chalumnae	35.35	1.00e-46	180.00
IUUC-Loc-051946	Lepisosteus oculatus	39.16	9.00e-58	218.00
IUUC-Lma-052960	Leptosphaeria maculans	26.71	9.00e-19	87.80
IUUC-Mor-056995	Magnaporthe oryzae	25.74	3.00e-15	76.30
IUUC-Mpo-057482	Magnaporthe poae	23.71	6.00e-16	78.60
IUUC-Ncr-068919	Neurospora crassa	24.02	7.00e-11	61.60
IUUC-Ont-072452	Oreochromis niloticus	38.33	1.00e-59	223.00
IUUC-Pma-094413	Petromyzon marinus	37.29	1.00e-48	187.00
IUUC-Pno-094833	Phaeosphaeria nodorum	27.70	3.00e-13	69.70
IUUC-Pte-104351	Pyrenophora teres	24.48	6.00e-14	73.60
IUUC-Pyt-104789	Pyrenophora triticirepentis	23.88	2.00e-15	76.60
IUUC-Sja-107829	Schizosaccharomyces japonicus	30.07	1.00e-18	87.40
IUUC-Tme-126922	Tuber melanosporum	26.16	5.00e-20	92.80
IUUC-Xma-134177	Xiphophorus maculatus	38.31	9.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence