iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104656

Ensembl Protein ID

EDU42493

UniProt Accession

B2WHI3; B2WHI3_PYRTR

Genbank Protein ID

EDU42493.1

Protein Name

Periodic tryptophan protein 2

Genbank Nucleotide ID

DS231625

Gene Name

PTRG_09442

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_09442	EDU42493	EDU42493

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-36	120.9	466	496
UBD/Beta-Prp	2.80e-72	242.7	252	444

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+++v++l+f +d  +lvsGs+D t+++W+
   Q: 466  GHEGPVSSLSFsPDaSTLVSGSWDRTVRIWN 496
           8***********99999*************9 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG.shdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
            +++a vt+ +f+p++k+lvtg + ++  + +l ++ ++++l+  ++++  ++++++g++l+ G s+   + vw++++++ +   ++gh ++ n+++++pd
   Q: 252  HQNNAHVTCANFHPESKLLVTGFSHGIFFIHELPDFAQISSLSISQNDIDYVAINKTGEWLAFGaSKLGQLLVWEWQSESYIL-KQQGHFDSMNTIAYSPD 351
           34455555555555555555555555555555555555555555555555555555555555543445555555555555555.55555555555555555 PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnderlvsgs 241
           g+ ++++++D+++++W +++g+++ t+t+ h + v+  +f ++g+ l ++sldg+v+ wdl++ +  rt+++  +  ++s++++p +e +  gs
   Q: 352  GQRIITAADDGKIKVWEVNSGFCVVTFTE-HMGGVTACEFAKKGNVLFTASLDGSVRAWDLHRYRNFRTFTApSRLSFSSLAVDPSGEVVCAGS 444
           55555555555555555555555555555.5555555555555555555555555555555555555555552234445555554444444444 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MKTDFQFSNL LGTVYSRGNL LFTPDGTCLL SPVGNRVTVF DLVNSKSHTL PFAHRKNITR 60
LALNPRGNLL LSVDEDGHAV LTNVPRRIVL YHFSLRGEVT ALAFSPSGRH FAVGIGRQIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGACTG ATTTCCAGGT AAGAGCGATG CGCAGATTGA TACATCAAGT GGCTAAAAAT 60
TGCAGTTCTC CAACTTGCTG GGTACAGTCT ACAGCAGAGG CAACCTTCTA TTCACACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	46.35	0.00e+00	779.00
IUUC-Atr-003033	Amborella trichopoda	45.85	5.00e-165	573.00
IUUC-Apl-003219	Anas platyrhynchos	45.44	0.00e+00	770.00
IUUC-Aca-004950	Anolis carolinensis	45.19	0.00e+00	784.00
IUUC-Aly-006213	Arabidopsis lyrata	45.96	1.00e-158	551.00
IUUC-Ath-006593	Arabidopsis thaliana	45.47	2.00e-157	548.00
IUUC-Ago-007916	Ashbya gossypii	53.63	0.00e+00	940.00
IUUC-Acl-008225	Aspergillus clavatus	69.14	0.00e+00	1241.00
IUUC-Afl-008390	Aspergillus flavus	66.40	0.00e+00	1222.00
IUUC-Afu-009039	Aspergillus fumigatus	68.81	0.00e+00	1227.00
IUUC-Ani-009228	Aspergillus nidulans	62.76	0.00e+00	1075.00
IUUC-Ang-009663	Aspergillus niger	67.52	0.00e+00	1192.00
IUUC-Aor-009923	Aspergillus oryzae	66.40	0.00e+00	1222.00
IUUC-Ate-010264	Aspergillus terreus	67.75	0.00e+00	1221.00
IUUC-Ame-010790	Astyanax mexicanus	44.59	1.00e-50	192.00
IUUC-Bgr-012066	Blumeria graminis	68.38	0.00e+00	1255.00
IUUC-Bta-012399	Bos taurus	45.87	0.00e+00	753.00
IUUC-Bci-013757	Botrytis cinerea	72.99	0.00e+00	1277.00
IUUC-Bdi-015028	Brachypodium distachyon	44.41	0.00e+00	712.00
IUUC-Bol-016521	Brassica oleracea	42.68	0.00e+00	687.00
IUUC-Bra-017096	Brassica rapa	42.74	0.00e+00	696.00
IUUC-Cel-018690	Caenorhabditis elegans	35.21	9.00e-152	529.00
IUUC-Cja-019229	Callithrix jacchus	45.53	0.00e+00	763.00
IUUC-Cfa-020504	Canis familiaris	45.41	0.00e+00	766.00
IUUC-Cpo-021574	Cavia porcellus	46.38	0.00e+00	785.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	44.48	8.00e-153	532.00
IUUC-Csa-023436	Chlorocebus sabaeus	46.10	0.00e+00	759.00
IUUC-Cin-025397	Ciona intestinalis	42.31	4.00e-165	573.00
IUUC-Csv-026194	Ciona savignyi	47.80	2.00e-145	508.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	69.48	0.00e+00	1227.00
IUUC-Cne-027031	Cryptococcus neoformans	50.98	0.00e+00	943.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.83	2.00e-71	262.00
IUUC-Dre-027514	Danio rerio	42.87	0.00e+00	711.00
IUUC-Dno-029191	Dasypus novemcinctus	50.08	3.00e-178	617.00
IUUC-Dor-030149	Dipodomys ordii	45.59	0.00e+00	781.00
IUUC-Dse-031260	Dothistroma septosporum	69.89	0.00e+00	820.00
IUUC-Dme-032043	Drosophila melanogaster	45.62	1.00e-151	529.00
IUUC-Ete-033102	Echinops telfairi	54.79	9.00e-160	555.00
IUUC-Eca-033223	Equus caballus	44.73	0.00e+00	727.00
IUUC-Fca-035795	Felis catus	44.03	0.00e+00	712.00
IUUC-Fal-036830	Ficedula albicollis	44.38	0.00e+00	768.00
IUUC-Fox-037835	Fusarium oxysporum	69.27	0.00e+00	1244.00
IUUC-Fso-038324	Fusarium solani	70.25	0.00e+00	1247.00
IUUC-Gmo-039355	Gadus morhua	44.36	0.00e+00	761.00
IUUC-Ggr-039840	Gaeumannomyces graminis	69.01	0.00e+00	1189.00
IUUC-Gga-040907	Gallus gallus	51.99	8.00e-162	561.00
IUUC-Gac-042624	Gasterosteus aculeatus	44.84	0.00e+00	761.00
IUUC-Gma-043034	Glycine max	46.64	1.00e-169	588.00
IUUC-Hsa-046145	Homo sapiens	45.48	0.00e+00	778.00
IUUC-Hvu-047416	Hordeum vulgare	43.72	0.00e+00	717.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	45.30	0.00e+00	783.00
IUUC-Kpa-049150	Komagataella pastoris	52.78	0.00e+00	927.00
IUUC-Lch-049460	Latimeria chalumnae	42.33	0.00e+00	635.00
IUUC-Lpe-050840	Leersia perrieri	48.52	2.00e-170	591.00
IUUC-Loc-052733	Lepisosteus oculatus	45.41	0.00e+00	776.00
IUUC-Lma-053277	Leptosphaeria maculans	88.79	0.00e+00	1576.00
IUUC-Laf-054294	Loxodonta africana	46.67	0.00e+00	758.00
IUUC-Mcc-054624	Macaca mulatta	46.21	0.00e+00	783.00
IUUC-Meu-056665	Macropus eugenii	45.61	2.00e-95	341.00
IUUC-Mor-057288	Magnaporthe oryzae	70.27	0.00e+00	1221.00
IUUC-Mpo-057594	Magnaporthe poae	69.24	0.00e+00	1193.00
IUUC-Mtr-058700	Medicago truncatula	42.47	0.00e+00	721.00
IUUC-Mla-058846	Melampsora laricipopulina	49.94	0.00e+00	890.00
IUUC-Mga-059207	Meleagris gallopavo	41.04	0.00e+00	656.00
IUUC-Mvi-060327	Microbotryum violaceum	52.70	0.00e+00	941.00
IUUC-Mmr-061264	Microcebus murinus	46.26	0.00e+00	751.00
IUUC-Mdo-062327	Monodelphis domestica	45.06	0.00e+00	744.00
IUUC-Mmu-063542	Mus musculus	44.36	0.00e+00	704.00
IUUC-Mac-065142	Musa acuminata	42.56	0.00e+00	709.00
IUUC-Mpu-066098	Mustela putorius furo	45.59	0.00e+00	658.00
IUUC-Mlu-067056	Myotis lucifugus	41.90	0.00e+00	655.00
IUUC-Nfi-068323	Neosartorya fischeri	69.03	0.00e+00	1237.00
IUUC-Ncr-068925	Neurospora crassa	70.61	0.00e+00	1280.00
IUUC-Nle-068970	Nomascus leucogenys	45.09	0.00e+00	771.00
IUUC-Opr-070966	Ochotona princeps	56.79	6.00e-110	389.00
IUUC-Ont-071252	Oreochromis niloticus	43.98	0.00e+00	763.00
IUUC-Oan-072737	Ornithorhynchus anatinus	39.44	7.00e-176	609.00
IUUC-Oba-075794	Oryza barthii	42.60	0.00e+00	678.00
IUUC-Obr-076617	Oryza brachyantha	48.45	6.00e-170	589.00
IUUC-Ogl-077022	Oryza glaberrima	44.00	0.00e+00	716.00
IUUC-Ogu-078757	Oryza glumaepatula	38.14	2.00e-100	358.00
IUUC-Oin-079813	Oryza indica	44.11	0.00e+00	710.00
IUUC-Olo-080265	Oryza longistaminata	48.52	1.00e-170	592.00
IUUC-Ome-081494	Oryza meridionalis	44.00	0.00e+00	707.00
IUUC-Oni-082639	Oryza nivara	37.95	3.00e-99	354.00
IUUC-Opu-084005	Oryza punctata	48.45	1.00e-170	592.00
IUUC-Oru-084883	Oryza rufipogon	38.14	5.00e-100	357.00
IUUC-Osa-086158	Oryza sativa	44.00	0.00e+00	709.00
IUUC-Ola-086822	Oryzias latipes	44.76	0.00e+00	764.00
IUUC-Olu-087741	Ostreococcus lucimarinus	31.94	2.00e-23	99.80
IUUC-Oga-088887	Otolemur garnettii	45.98	0.00e+00	758.00
IUUC-Oar-090110	Ovis aries	44.94	0.00e+00	714.00
IUUC-Pan-092808	Papio anubis	46.85	0.00e+00	789.00
IUUC-Psi-093954	Pelodiscus sinensis	45.56	0.00e+00	789.00
IUUC-Pno-094922	Phaeosphaeria nodorum	91.23	0.00e+00	1655.00
IUUC-Ppa-095678	Physcomitrella patens	45.19	0.00e+00	696.00
IUUC-Pfo-097175	Poecilia formosa	44.54	0.00e+00	781.00
IUUC-Pab-098155	Pongo abelii	45.53	0.00e+00	782.00
IUUC-Pop-099635	Populus trichocarpa	46.96	2.00e-165	574.00
IUUC-Pca-100947	Procavia capensis	43.93	0.00e+00	720.00
IUUC-Ppe-101552	Prunus persica	48.29	6.00e-172	596.00
IUUC-Pva-102744	Pteropus vampyrus	41.97	0.00e+00	650.00
IUUC-Pgr-103389	Puccinia graminis	48.94	0.00e+00	872.00
IUUC-Ptt-103953	Puccinia triticina	40.99	0.00e+00	674.00
IUUC-Pte-104079	Pyrenophora teres	99.31	0.00e+00	1711.00
IUUC-Rno-105502	Rattus norvegicus	51.86	3.00e-180	624.00
IUUC-Sce-106390	Saccharomyces cerevisiae	55.67	0.00e+00	1009.00
IUUC-Sha-107264	Sarcophilus harrisii	45.57	9.00e-97	345.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	54.47	0.00e+00	998.00
IUUC-Spo-108348	Schizosaccharomyces pombe	56.12	0.00e+00	976.00
IUUC-Smo-109327	Selaginella moellendorffii	43.34	0.00e+00	718.00
IUUC-Sit-110304	Setaria italica	49.18	5.00e-178	616.00
IUUC-Sly-111620	Solanum lycopersicum	46.01	5.00e-157	546.00
IUUC-Stu-112877	Solanum tuberosum	46.39	2.00e-169	588.00
IUUC-Sbi-114702	Sorghum bicolor	44.47	0.00e+00	733.00
IUUC-Sre-115129	Sporisorium reilianum	49.55	0.00e+00	837.00
IUUC-Ssc-115931	Sus scrofa	45.08	5.00e-94	336.00
IUUC-Tgu-116787	Taeniopygia guttata	44.38	0.00e+00	772.00
IUUC-Tru-118218	Takifugu rubripes	44.34	0.00e+00	760.00
IUUC-Tsy-119401	Tarsius syrichta	47.70	6.00e-124	436.00
IUUC-Tni-120046	Tetraodon nigroviridis	44.23	0.00e+00	730.00
IUUC-Tca-121685	Theobroma cacao	41.60	0.00e+00	688.00
IUUC-Tre-122154	Trichoderma reesei	69.98	0.00e+00	1261.00
IUUC-Tvi-122451	Trichoderma virens	70.21	0.00e+00	1271.00
IUUC-Tae-125397	Triticum aestivum	46.58	5.00e-124	437.00
IUUC-Tur-126650	Triticum urartu	43.55	0.00e+00	658.00
IUUC-Tme-127005	Tuber melanosporum	65.13	0.00e+00	1142.00
IUUC-Tbe-128102	Tupaia belangeri	44.15	4.00e-130	457.00
IUUC-Ttr-128259	Tursiops truncatus	46.43	0.00e+00	762.00
IUUC-Uma-129511	Ustilago maydis	49.32	0.00e+00	806.00
IUUC-Vda-129833	Verticillium dahliae	66.67	0.00e+00	1152.00
IUUC-Vvi-131572	Vitis vinifera	42.30	0.00e+00	681.00
IUUC-Xtr-131776	Xenopus tropicalis	34.88	2.00e-57	215.00
IUUC-Xma-133887	Xiphophorus maculatus	45.07	0.00e+00	763.00
IUUC-Yli-134427	Yarrowia lipolytica	57.58	0.00e+00	1022.00
IUUC-Zma-135980	Zea mays	48.85	2.00e-171	594.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence