iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068616

Ensembl Protein ID

CADNFIAP00004375

UniProt Accession

A1DM00; A1DM00_NEOFI

Genbank Protein ID

EAW15821.1

Protein Name

RNA polymerase II Elongator subunit, putative

Genbank Nucleotide ID

DS027698

Gene Name

NFIA_051660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00004503	CADNFIAT00004503	CADNFIAP00004375

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-42	139.6	211	255
UBD/Beta-Prp	8.60e-51	171.9	575	807

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v++l+f       s+  ll+s+s D+ i++W+l +g  +k
   Q: 211  GHEAWVRSLSFtedkqskSGdLLLASASQDKYIRLWRLQRGEATK 255
           8************99998555789**************9998776 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgti.....kvwdvttgkllr.slsgheaevtavkfspdgkilvtgseDrtikvw.....dlstgkcvht.lkg 92
            i+ v++  d++l+at+++ ++i     +++d++++  +r sl+ h+ ++t+++fs+d+++l+++++Dr   v+     d+s+++ + +  kg
   Q: 575  EISTVAVNHDRTLVATACKASSIdhaviRLYDTSDWREIRpSLKAHSLTITSLCFSSDDQYLLSVGRDRQWAVFlrsgqDPSSFSLLTSnPKG 667
           57779999999******99998877778*********987477*********************************7777776665544145* PP
   S: 93   hedsvlslsfsp..sgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.......ktgkll 172
           h++++l+ ++ p   + +++++++d+ +++w+  +++   +    l++   +v+++ +  d+ + l++G   +++ ++++       +     
   Q: 668  HSRMILDAAWAPqaANPVFATAGRDKSVKLWEKVEDSFACKttiSLENSVTAVSILPSVLDAsFFLATGEESGKLSIYQVtvdgleaR----- 755
           ************7666***************98776655445576666666777777777777*****************66664441..... PP
   S: 173  rtl......tgghtdsvyslsfdsng..........kelvsgsldgtvklwdlq 210
                    +    ++++ ls++++           + l+ +s+d++v+++ ++
   Q: 756  --HvatvdrSVSPSRAITQLSWRPSHqtdvrdtqsrFKLAVASEDSSVRVYAIS 807
           ..3333355333688899999888778888888899***************875 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MVSITTEYIS VGGNRHPAAA DWDVQLGVLA FGADNNVALW DPRDASQRGV YALLVGHTDK 60
VSAVRFYTCP ATGTKLLLTG SIDQTIRIWR ADAVDPAKFA HAHTLTGHTG SVNTIAVADG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTCAA TCACGACAGA ATACATCAGT GTTGGGGGAA ACAGGCATCC AGCCGCCGCA 60
GACTGGGATG TGCAGTTAGG TGTGCTCGCC TTTGGTGCAG ATAACAATGT GGCCTTGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000418--Ets_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50061--ETS_DOMAIN_3
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

KEGG

nfi:NFIA_051660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	30.78	1.00e-89	322.00
IUUC-Aml-002049	Ailuropoda melanoleuca	33.03	1.00e-86	312.00
IUUC-Atr-002456	Amborella trichopoda	32.25	1.00e-98	352.00
IUUC-Apl-004053	Anas platyrhynchos	33.37	5.00e-110	390.00
IUUC-Aca-004535	Anolis carolinensis	29.89	5.00e-98	350.00
IUUC-Aly-005746	Arabidopsis lyrata	31.32	2.00e-89	322.00
IUUC-Ath-006664	Arabidopsis thaliana	30.93	7.00e-87	313.00
IUUC-Ago-007971	Ashbya gossypii	40.54	1.00e-161	561.00
IUUC-Acl-008173	Aspergillus clavatus	80.39	0.00e+00	1323.00
IUUC-Afl-008665	Aspergillus flavus	72.05	0.00e+00	643.00
IUUC-Afu-008976	Aspergillus fumigatus	95.46	0.00e+00	1551.00
IUUC-Ani-009284	Aspergillus nidulans	71.66	0.00e+00	1168.00
IUUC-Ang-009809	Aspergillus niger	76.33	0.00e+00	1272.00
IUUC-Aor-009959	Aspergillus oryzae	73.55	0.00e+00	1193.00
IUUC-Ate-010442	Aspergillus terreus	72.62	0.00e+00	1198.00
IUUC-Ame-011409	Astyanax mexicanus	33.49	1.00e-113	402.00
IUUC-Bgr-012137	Blumeria graminis	50.85	0.00e+00	753.00
IUUC-Bta-012892	Bos taurus	33.33	5.00e-111	393.00
IUUC-Bci-013944	Botrytis cinerea	52.34	0.00e+00	769.00
IUUC-Bdi-014512	Brachypodium distachyon	30.42	4.00e-95	340.00
IUUC-Bol-015741	Brassica oleracea	31.33	2.00e-97	348.00
IUUC-Bra-017367	Brassica rapa	31.16	3.00e-98	351.00
IUUC-Cel-018712	Caenorhabditis elegans	29.69	6.00e-72	263.00
IUUC-Cja-018865	Callithrix jacchus	30.80	3.00e-94	338.00
IUUC-Cfa-021006	Canis familiaris	33.09	5.00e-108	384.00
IUUC-Cpo-021370	Cavia porcellus	32.98	3.00e-105	374.00
IUUC-Csa-023845	Chlorocebus sabaeus	32.29	5.00e-105	373.00
IUUC-Cho-024640	Choloepus hoffmanni	31.65	3.00e-57	214.00
IUUC-Cin-025772	Ciona intestinalis	33.62	8.00e-112	396.00
IUUC-Csv-025891	Ciona savignyi	31.69	7.00e-102	363.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	47.89	0.00e+00	679.00
IUUC-Cne-027081	Cryptococcus neoformans	37.26	4.00e-113	400.00
IUUC-Cme-027225	Cyanidioschyzon merolae	25.79	1.00e-44	173.00
IUUC-Dre-028250	Danio rerio	33.50	9.00e-109	386.00
IUUC-Dno-028847	Dasypus novemcinctus	32.95	3.00e-108	384.00
IUUC-Dor-030351	Dipodomys ordii	32.29	3.00e-103	368.00
IUUC-Dse-031317	Dothistroma septosporum	51.96	0.00e+00	759.00
IUUC-Dme-032019	Drosophila melanogaster	34.83	3.00e-118	417.00
IUUC-Ete-033194	Echinops telfairi	30.46	6.00e-54	204.00
IUUC-Eca-033779	Equus caballus	33.13	1.00e-106	379.00
IUUC-Eeu-034790	Erinaceus europaeus	31.98	4.00e-60	224.00
IUUC-Fca-036090	Felis catus	34.94	2.00e-108	384.00
IUUC-Fal-037663	Ficedula albicollis	31.73	6.00e-104	370.00
IUUC-Fox-037828	Fusarium oxysporum	50.18	0.00e+00	728.00
IUUC-Fso-038462	Fusarium solani	50.06	0.00e+00	704.00
IUUC-Gmo-039450	Gadus morhua	33.77	1.00e-111	395.00
IUUC-Ggr-040023	Gaeumannomyces graminis	43.73	0.00e+00	648.00
IUUC-Gga-040480	Gallus gallus	33.53	3.00e-111	394.00
IUUC-Gac-041544	Gasterosteus aculeatus	33.37	5.00e-117	413.00
IUUC-Gma-044048	Glycine max	31.29	2.00e-104	371.00
IUUC-Ggo-045381	Gorilla gorilla	30.59	8.00e-96	343.00
IUUC-Hsa-046096	Homo sapiens	31.01	7.00e-95	340.00
IUUC-Hvu-047494	Hordeum vulgare	30.54	3.00e-95	341.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	29.19	5.00e-87	313.00
IUUC-Kpa-049241	Komagataella pastoris	36.71	6.00e-137	479.00
IUUC-Lch-050512	Latimeria chalumnae	32.44	1.00e-101	362.00
IUUC-Lpe-051448	Leersia perrieri	30.02	1.00e-92	332.00
IUUC-Loc-051882	Lepisosteus oculatus	33.53	9.00e-118	416.00
IUUC-Lma-053023	Leptosphaeria maculans	52.26	0.00e+00	783.00
IUUC-Laf-054519	Loxodonta africana	34.68	5.00e-111	394.00
IUUC-Mcc-055580	Macaca mulatta	30.23	5.00e-98	350.00
IUUC-Meu-056606	Macropus eugenii	32.32	6.00e-31	127.00
IUUC-Mor-057109	Magnaporthe oryzae	47.58	0.00e+00	707.00
IUUC-Mpo-057297	Magnaporthe poae	45.02	0.00e+00	677.00
IUUC-Mtr-058348	Medicago truncatula	31.48	2.00e-104	371.00
IUUC-Mla-059159	Melampsora laricipopulina	29.08	2.00e-86	311.00
IUUC-Mga-059778	Meleagris gallopavo	30.62	2.00e-63	235.00
IUUC-Mvi-060447	Microbotryum violaceum	32.58	2.00e-113	401.00
IUUC-Mmr-061139	Microcebus murinus	30.98	6.00e-104	370.00
IUUC-Mdo-061866	Monodelphis domestica	33.52	7.00e-118	416.00
IUUC-Mmu-063390	Mus musculus	33.18	1.00e-105	375.00
IUUC-Mac-064693	Musa acuminata	31.28	9.00e-100	356.00
IUUC-Mpu-066547	Mustela putorius furo	33.45	3.00e-108	384.00
IUUC-Mlu-067156	Myotis lucifugus	33.26	9.00e-111	392.00
IUUC-Ncr-068915	Neurospora crassa	43.14	0.00e+00	653.00
IUUC-Nle-069958	Nomascus leucogenys	32.49	6.00e-103	367.00
IUUC-Opr-071093	Ochotona princeps	29.88	3.00e-39	155.00
IUUC-Ont-072178	Oreochromis niloticus	33.53	5.00e-118	416.00
IUUC-Oan-073667	Ornithorhynchus anatinus	30.55	2.00e-104	371.00
IUUC-Ocu-074662	Oryctolagus cuniculus	34.03	1.00e-110	392.00
IUUC-Oba-075577	Oryza barthii	30.51	2.00e-98	351.00
IUUC-Obr-076566	Oryza brachyantha	30.63	1.00e-100	359.00
IUUC-Ogl-077054	Oryza glaberrima	30.46	2.00e-97	348.00
IUUC-Ogu-078846	Oryza glumaepatula	30.51	5.00e-98	350.00
IUUC-Oin-079084	Oryza indica	30.39	3.00e-97	348.00
IUUC-Olo-080933	Oryza longistaminata	28.68	1.00e-80	293.00
IUUC-Ome-081500	Oryza meridionalis	28.79	7.00e-84	303.00
IUUC-Oni-082352	Oryza nivara	30.48	6.00e-97	347.00
IUUC-Opu-084116	Oryza punctata	30.02	2.00e-96	345.00
IUUC-Oru-085249	Oryza rufipogon	30.39	3.00e-97	348.00
IUUC-Osa-086270	Oryza sativa	30.39	3.00e-97	348.00
IUUC-Ola-086625	Oryzias latipes	31.12	1.00e-93	335.00
IUUC-Olu-087638	Ostreococcus lucimarinus	31.90	4.00e-77	280.00
IUUC-Oga-088634	Otolemur garnettii	31.98	2.00e-86	311.00
IUUC-Oar-089475	Ovis aries	33.85	1.00e-107	382.00
IUUC-Ptr-091131	Pan troglodytes	32.13	7.00e-105	373.00
IUUC-Pan-092869	Papio anubis	32.14	3.00e-107	380.00
IUUC-Psi-093146	Pelodiscus sinensis	35.72	2.00e-107	381.00
IUUC-Pma-094479	Petromyzon marinus	31.32	7.00e-97	346.00
IUUC-Pno-095061	Phaeosphaeria nodorum	45.33	4.00e-170	589.00
IUUC-Ppa-095618	Physcomitrella patens	31.74	5.00e-92	331.00
IUUC-Pfo-096816	Poecilia formosa	33.30	5.00e-113	400.00
IUUC-Pab-097548	Pongo abelii	31.98	1.00e-105	375.00
IUUC-Pop-099643	Populus trichocarpa	32.16	6.00e-101	360.00
IUUC-Pca-100983	Procavia capensis	30.79	2.00e-42	166.00
IUUC-Ppe-101301	Prunus persica	31.83	5.00e-99	353.00
IUUC-Pva-102460	Pteropus vampyrus	33.14	3.00e-108	384.00
IUUC-Pgr-103507	Puccinia graminis	29.62	9.00e-85	306.00
IUUC-Ptt-103892	Puccinia triticina	30.09	2.00e-72	265.00
IUUC-Pte-104283	Pyrenophora teres	51.62	0.00e+00	785.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	50.71	0.00e+00	754.00
IUUC-Rno-105842	Rattus norvegicus	33.22	2.00e-105	375.00
IUUC-Sce-106459	Saccharomyces cerevisiae	38.88	2.00e-153	534.00
IUUC-Sha-106586	Sarcophilus harrisii	27.13	6.00e-76	277.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	39.13	4.00e-132	463.00
IUUC-Spo-108302	Schizosaccharomyces pombe	37.13	4.00e-134	470.00
IUUC-Smo-108861	Selaginella moellendorffii	29.83	6.00e-91	327.00
IUUC-Sit-109915	Setaria italica	30.91	3.00e-98	351.00
IUUC-Sly-111714	Solanum lycopersicum	30.89	2.00e-97	348.00
IUUC-Stu-112631	Solanum tuberosum	31.44	2.00e-98	351.00
IUUC-Sar-113200	Sorex araneus	31.28	2.00e-84	305.00
IUUC-Sbi-114582	Sorghum bicolor	31.68	1.00e-101	362.00
IUUC-Sre-115001	Sporisorium reilianum	28.45	2.00e-45	176.00
IUUC-Ssc-115519	Sus scrofa	33.10	8.00e-109	386.00
IUUC-Tgu-116987	Taeniopygia guttata	32.94	1.00e-101	362.00
IUUC-Tru-118476	Takifugu rubripes	32.55	1.00e-110	392.00
IUUC-Tsy-119230	Tarsius syrichta	34.36	7.00e-51	194.00
IUUC-Tni-120448	Tetraodon nigroviridis	25.93	1.00e-51	196.00
IUUC-Tca-121650	Theobroma cacao	31.90	6.00e-95	340.00
IUUC-Tre-122086	Trichoderma reesei	49.29	0.00e+00	676.00
IUUC-Tvi-122397	Trichoderma virens	49.10	0.00e+00	649.00
IUUC-Tae-123972	Triticum aestivum	30.68	1.00e-95	342.00
IUUC-Tur-126578	Triticum urartu	30.69	3.00e-95	341.00
IUUC-Tme-126927	Tuber melanosporum	48.37	0.00e+00	674.00
IUUC-Tbe-127922	Tupaia belangeri	42.31	3.00e-42	165.00
IUUC-Ttr-128918	Tursiops truncatus	33.02	7.00e-110	389.00
IUUC-Uma-129474	Ustilago maydis	27.63	7.00e-47	181.00
IUUC-Vda-129944	Verticillium dahliae	47.96	0.00e+00	695.00
IUUC-Vpa-130693	Vicugna pacos	34.63	1.00e-104	372.00
IUUC-Vvi-130949	Vitis vinifera	31.91	1.00e-102	365.00
IUUC-Xtr-132639	Xenopus tropicalis	31.71	4.00e-107	380.00
IUUC-Xma-134223	Xiphophorus maculatus	36.03	2.00e-80	291.00
IUUC-Yli-134601	Yarrowia lipolytica	41.70	3.00e-154	536.00
IUUC-Zma-135952	Zea mays	31.50	2.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence