iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017358

Ensembl Protein ID

Bra020379.1-P

UniProt Accession

M4DV36; M4DV36_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020379	Bra020379.1	Bra020379.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-27	93.1	264	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +v+claf   +++++++Gs D+t+kv+Dlr+
   Q: 264  HSREVNCLAFnplNEWIVATGSTDKTVKVFDLRR 297
           9**********9777****************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MARDDEETQE EIKERLINEE YKTWKRNTPF LYDLVISHLL EWPSLTVEWL PDREEPSGKN 60
YSVQKMILGT HTHVNEANYL MLAQVQLPLA DAEYNDERAK FGSATGKVQV IKKINHEGEM 120

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Nucleotide Sequence
(Fasta)

ATGGCGAGAG ACGACGAGGA GACGCAAGAA GAGATCAAGG AGCGACTGAT CAACGAAGAG 60
TACAAGACCT GGAAGAGGAA CACTCCTTTC CTCTACGATC TCGTCATCAG CCACCTCCTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015341	Brassica oleracea	89.50	0.00e+00	766.00
IUUC-Kpa-049119	Komagataella pastoris	36.79	1.00e-70	259.00
IUUC-Lma-053275	Leptosphaeria maculans	41.50	6.00e-65	240.00
IUUC-Pno-095153	Phaeosphaeria nodorum	43.91	1.00e-98	353.00
IUUC-Pte-104332	Pyrenophora teres	44.10	4.00e-100	357.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	44.10	3.00e-100	358.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	46.36	3.00e-105	375.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence