iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107925

Ensembl Protein ID

EEB09686

UniProt Accession

B6K832; B6K832_SCHJY

Genbank Protein ID

EEB09686.1

Protein Name

U3 snoRNP-associated protein Utp7

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_04908

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04908	EEB09686	EEB09686

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-08	32.1	264	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++++++a   + +++v+++ D  +kvWD+rt++ ++s
   Q: 264  HRGPIRDVAIdREgKYMVTAGADSLLKVWDVRTFKEVHS 302
           99********9778*******************998875 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSEIQKLDLS ETGAVAKYSR GKKIGYKKIR DKKLRSNIQK IEERIDVAEN ALAGAEFLQV 60
DEPGYLEAEG LEKTYKFTQK ELVDNVAIET AQKGFSLKLD KFGGYTFDYT RDGAMVLMGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATAAGTCTT CGTTTCGTTC TCAACCAAAA ATTTAAAGCT GGGTGTTCTT GGTCTCTTAC 60
TACCATATAG CAGACATGGG CCCTAGACGG AAAACAAAGA GTTCTACTTC AGCTAAATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030688--C:preribosome, small subunit precursor
GO:0032040--C:small-subunit processome
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	47.12	2.00e-108	384.00
IUUC-Atr-002528	Amborella trichopoda	44.79	3.00e-105	373.00
IUUC-Aly-005663	Arabidopsis lyrata	42.56	1.00e-100	358.00
IUUC-Ath-007405	Arabidopsis thaliana	42.06	8.00e-100	355.00
IUUC-Ang-009764	Aspergillus niger	50.39	1.00e-146	511.00
IUUC-Ame-011572	Astyanax mexicanus	44.09	1.00e-110	391.00
IUUC-Bdi-014459	Brachypodium distachyon	48.56	9.00e-110	388.00
IUUC-Bol-015169	Brassica oleracea	41.88	1.00e-96	346.00
IUUC-Bra-016837	Brassica rapa	41.32	2.00e-95	341.00
IUUC-Cel-018465	Caenorhabditis elegans	38.32	3.00e-99	353.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	44.42	4.00e-128	449.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	50.78	7.00e-152	528.00
IUUC-Cne-026784	Cryptococcus neoformans	45.11	1.00e-95	341.00
IUUC-Dre-028533	Danio rerio	43.66	7.00e-105	372.00
IUUC-Dse-031280	Dothistroma septosporum	50.10	4.00e-148	516.00
IUUC-Eeu-034982	Erinaceus europaeus	44.18	1.00e-64	238.00
IUUC-Fox-037980	Fusarium oxysporum	52.16	2.00e-150	523.00
IUUC-Fso-038154	Fusarium solani	51.85	4.00e-154	535.00
IUUC-Gmo-039548	Gadus morhua	42.55	1.00e-106	378.00
IUUC-Ggr-039976	Gaeumannomyces graminis	50.49	2.00e-153	533.00
IUUC-Gac-042249	Gasterosteus aculeatus	42.83	2.00e-110	390.00
IUUC-Gma-042693	Glycine max	42.36	1.00e-100	358.00
IUUC-Hvu-047436	Hordeum vulgare	48.26	2.00e-78	283.00
IUUC-Kpa-049329	Komagataella pastoris	48.00	1.00e-133	467.00
IUUC-Lpe-051501	Leersia perrieri	46.02	3.00e-100	360.00
IUUC-Loc-051736	Lepisosteus oculatus	46.30	9.00e-106	375.00
IUUC-Meu-056419	Macropus eugenii	45.43	4.00e-92	329.00
IUUC-Mor-057146	Magnaporthe oryzae	51.19	2.00e-153	533.00
IUUC-Mpo-057512	Magnaporthe poae	51.27	1.00e-156	544.00
IUUC-Mtr-058139	Medicago truncatula	43.34	1.00e-103	368.00
IUUC-Mla-059028	Melampsora laricipopulina	41.13	9.00e-111	391.00
IUUC-Mvi-060533	Microbotryum violaceum	50.40	8.00e-115	405.00
IUUC-Mac-065643	Musa acuminata	43.80	3.00e-100	357.00
IUUC-Ont-071977	Oreochromis niloticus	44.55	2.00e-108	384.00
IUUC-Oba-075525	Oryza barthii	45.32	2.00e-104	370.00
IUUC-Obr-076468	Oryza brachyantha	46.14	7.00e-105	372.00
IUUC-Ogl-077395	Oryza glaberrima	45.32	2.00e-104	370.00
IUUC-Ogu-078730	Oryza glumaepatula	45.08	8.00e-104	368.00
IUUC-Oin-079797	Oryza indica	45.08	7.00e-104	369.00
IUUC-Olo-080539	Oryza longistaminata	44.65	1.00e-103	368.00
IUUC-Oni-082635	Oryza nivara	45.08	7.00e-104	369.00
IUUC-Opu-083733	Oryza punctata	45.56	2.00e-104	370.00
IUUC-Oru-084560	Oryza rufipogon	45.08	7.00e-104	369.00
IUUC-Osa-085463	Oryza sativa	45.08	6.00e-104	369.00
IUUC-Ola-086667	Oryzias latipes	46.98	3.00e-114	403.00
IUUC-Olu-087881	Ostreococcus lucimarinus	44.42	5.00e-122	429.00
IUUC-Pma-094742	Petromyzon marinus	45.73	1.00e-101	361.00
IUUC-Ppa-095230	Physcomitrella patens	49.76	1.00e-127	447.00
IUUC-Pop-099756	Populus trichocarpa	42.17	4.00e-99	353.00
IUUC-Ppe-101354	Prunus persica	43.13	8.00e-100	355.00
IUUC-Pte-104146	Pyrenophora teres	46.74	2.00e-134	470.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	46.17	2.00e-132	464.00
IUUC-Sce-106227	Saccharomyces cerevisiae	47.46	3.00e-143	499.00
IUUC-Spo-108359	Schizosaccharomyces pombe	79.11	0.00e+00	816.00
IUUC-Smo-108814	Selaginella moellendorffii	48.69	5.00e-119	419.00
IUUC-Sit-110158	Setaria italica	47.12	4.00e-97	346.00
IUUC-Sly-111569	Solanum lycopersicum	44.77	4.00e-96	343.00
IUUC-Stu-112403	Solanum tuberosum	44.50	2.00e-96	343.00
IUUC-Sbi-113839	Sorghum bicolor	46.99	1.00e-98	351.00
IUUC-Sre-115150	Sporisorium reilianum	47.02	1.00e-121	427.00
IUUC-Tru-118535	Takifugu rubripes	45.19	2.00e-111	394.00
IUUC-Tca-121165	Theobroma cacao	42.17	1.00e-97	348.00
IUUC-Tre-122114	Trichoderma reesei	52.05	2.00e-156	543.00
IUUC-Tvi-122437	Trichoderma virens	50.98	1.00e-153	534.00
IUUC-Tae-125874	Triticum aestivum	46.88	3.00e-108	383.00
IUUC-Tur-126078	Triticum urartu	47.23	9.00e-102	362.00
IUUC-Tme-127208	Tuber melanosporum	56.34	1.00e-171	594.00
IUUC-Ttr-129047	Tursiops truncatus	44.74	5.00e-103	366.00
IUUC-Uma-129320	Ustilago maydis	48.13	1.00e-121	428.00
IUUC-Vda-129926	Verticillium dahliae	48.82	4.00e-149	519.00
IUUC-Vvi-131643	Vitis vinifera	42.69	5.00e-98	349.00
IUUC-Yli-134674	Yarrowia lipolytica	50.12	1.00e-121	427.00
IUUC-Zma-135903	Zea mays	45.54	8.00e-94	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence