iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPTM	UniProt
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/MUB	MUB	25320573

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.80e-13	50.4	7	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsdtVaeLKeki.....ekklgip.pe.qqrLiykGkiLeddktLadyglk 62
           v+++++ +dgs +++++++p++tV+ LKe+i     ++k+ +p ++ +++Li++GkiLe++kt+a+++++
   Q: 7    VELKFRLYDGSdVGPFQYSPTATVSMLKERIvsewpKDKKIVPkSAsDIKLINAGKILENGKTVAQCKAP 76
           6899***************************************9878********************985 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Ubiquitous.

Protein Sequence
(Fasta)

MPEEDLVELK FRLYDGSDVG PFQYSPTATV SMLKERIVSE WPKDKKIVPK SASDIKLINA 60
GKILENGKTV AQCKAPFDDL PKSVITMHVV VQLSPTKARP EKKIEKEEAP QRSFCSCTIM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGCTTTTG ACTAATAAAG AAACATACTT TTCCACAATT TTCTTGTCTT TTTATCTTAT 60
TTCCTTACTC GTCAGGGATT CCCTGTAACG CGGCAATCCT GACGAAAGAC ATATCAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0488--Methylation
KW-0564--Palmitate
KW-0636--Prenylation
KW-1185--Reference proteome

Interpro

IPR017000--MUB
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

ath:AT3G26980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006497	Arabidopsis lyrata	98.33	5.00e-66	241.00
IUUC-Bgr-012046	Blumeria graminis	26.67	3.00e-04	38.10
IUUC-Bci-013683	Botrytis cinerea	28.28	1.00e-04	39.70
IUUC-Bdi-014347	Brachypodium distachyon	62.16	5.00e-32	129.00
IUUC-Bol-016052	Brassica oleracea	94.17	5.00e-64	234.00
IUUC-Bra-017154	Brassica rapa	93.33	2.00e-63	232.00
IUUC-Cre-022606	Chlamydomonas reinhardtii	32.23	4.00e-16	75.90
IUUC-Csv-026241	Ciona savignyi	31.03	5.20e-02	29.60
IUUC-Cne-026899	Cryptococcus neoformans	36.96	3.00e-03	33.90
IUUC-Mtr-057898	Medicago truncatula	68.33	1.00e-47	180.00
IUUC-Mla-059132	Melampsora laricipopulina	29.73	5.90e-02	31.60
IUUC-Mac-065195	Musa acuminata	64.17	1.00e-39	154.00
IUUC-Ppe-101480	Prunus persica	74.17	4.00e-51	192.00
IUUC-Ptt-103784	Puccinia triticina	22.64	8.00e-03	32.70
IUUC-Sit-110165	Setaria italica	61.46	2.00e-31	127.00
IUUC-Sly-111479	Solanum lycopersicum	70.83	8.00e-48	181.00
IUUC-Stu-112848	Solanum tuberosum	72.73	2.00e-41	159.00
IUUC-Sbi-114866	Sorghum bicolor	61.06	2.00e-32	130.00
IUUC-Tur-126246	Triticum urartu	62.50	1.00e-32	132.00
IUUC-Tme-127058	Tuber melanosporum	32.76	2.00e-02	32.00
IUUC-Uma-129510	Ustilago maydis	23.33	8.00e-04	36.60
IUUC-Vvi-131315	Vitis vinifera	71.67	3.00e-49	186.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence