iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053714

Ensembl Protein ID

ENSLAFP00000001936.3

UniProt Accession

G3SQ80; G3SQ80_LOXAF

Protein Name

Uncharacterized protein

Gene Name

PATZ1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000002317.3	ENSLAFT00000033344.1	ENSLAFP00000029452.1
ENSLAFG00000002317.3	ENSLAFT00000002317.3	ENSLAFP00000001936.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	2.10e-14	54.0	41	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees......................ksklmveikdvqpevfrallkFlYtgkl 65
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l +s                      + + + e++ ++ +vf ++l+F Yt+++
   Q: 41   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDSgaadggptdvggaaagpgggagD-SRELEMHTISSKVFGDILDFAYTSRI 126
           8**********************************999********************76.999********************997 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE SFPAHRAVLA 60
ACSEYFESVF SAQLGDSGAA DGGPTDVGGA AAGPGGGAGD SRELEMHTIS SKVFGDILDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAG TGAACGACGC TTCTTGCGGC CCGTCGGGCT GCTACACCTA CCAGGTGAGC 60
AGGCACAGCA CCGAGATGCT GCACAACCTT AACCAGCAGC GCAAAAACGG CGGGCGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR023413--GFP-like
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation

KEGG

lav:100677392

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001393	Ailuropoda melanoleuca	98.84	0.00e+00	1275.00
IUUC-Ame-010861	Astyanax mexicanus	58.62	0.00e+00	712.00
IUUC-Bta-012647	Bos taurus	98.84	0.00e+00	1274.00
IUUC-Cja-019987	Callithrix jacchus	97.97	0.00e+00	1239.00
IUUC-Cfa-020091	Canis familiaris	98.98	0.00e+00	1275.00
IUUC-Cpo-021731	Cavia porcellus	97.82	0.00e+00	1256.00
IUUC-Csa-023323	Chlorocebus sabaeus	95.99	0.00e+00	942.00
IUUC-Cho-024339	Choloepus hoffmanni	95.38	8.00e-105	374.00
IUUC-Dre-028776	Danio rerio	55.30	0.00e+00	660.00
IUUC-Dno-028988	Dasypus novemcinctus	98.55	0.00e+00	1172.00
IUUC-Eca-034224	Equus caballus	92.14	0.00e+00	1164.00
IUUC-Fca-035834	Felis catus	92.58	0.00e+00	1162.00
IUUC-Gmo-038564	Gadus morhua	54.67	0.00e+00	678.00
IUUC-Gga-040923	Gallus gallus	87.77	0.00e+00	1147.00
IUUC-Gac-042115	Gasterosteus aculeatus	56.49	0.00e+00	738.00
IUUC-Ggo-045483	Gorilla gorilla	98.69	0.00e+00	1278.00
IUUC-Hsa-045831	Homo sapiens	98.54	0.00e+00	1250.00
IUUC-Itr-048966	Ictidomys tridecemlineatus	98.84	0.00e+00	1276.00
IUUC-Lch-050298	Latimeria chalumnae	70.55	0.00e+00	906.00
IUUC-Mcc-055844	Macaca mulatta	81.77	0.00e+00	749.00
IUUC-Mmr-061004	Microcebus murinus	95.08	0.00e+00	1217.00
IUUC-Mdo-061816	Monodelphis domestica	83.71	0.00e+00	969.00
IUUC-Mmu-063774	Mus musculus	98.11	0.00e+00	1269.00
IUUC-Mpu-066238	Mustela putorius furo	96.18	0.00e+00	941.00
IUUC-Mlu-068149	Myotis lucifugus	98.69	0.00e+00	1275.00
IUUC-Opr-071017	Ochotona princeps	88.33	0.00e+00	753.00
IUUC-Ont-072352	Oreochromis niloticus	55.17	0.00e+00	710.00
IUUC-Oan-073423	Ornithorhynchus anatinus	92.89	0.00e+00	1205.00
IUUC-Ocu-074291	Oryctolagus cuniculus	95.42	0.00e+00	937.00
IUUC-Oga-088646	Otolemur garnettii	98.40	0.00e+00	1264.00
IUUC-Oar-089847	Ovis aries	88.79	0.00e+00	1097.00
IUUC-Ptr-091669	Pan troglodytes	98.69	0.00e+00	1278.00
IUUC-Pfo-097307	Poecilia formosa	53.31	0.00e+00	665.00
IUUC-Pab-097693	Pongo abelii	98.40	0.00e+00	1276.00
IUUC-Pca-100274	Procavia capensis	83.84	3.00e-144	505.00
IUUC-Pva-102261	Pteropus vampyrus	98.84	0.00e+00	1275.00
IUUC-Ptt-103895	Puccinia triticina	38.10	7.00e-06	44.70
IUUC-Rno-105339	Rattus norvegicus	91.70	0.00e+00	1155.00
IUUC-Ssc-116429	Sus scrofa	91.85	0.00e+00	1162.00
IUUC-Tgu-116916	Taeniopygia guttata	81.66	0.00e+00	976.00
IUUC-Tru-117811	Takifugu rubripes	57.73	0.00e+00	754.00
IUUC-Tni-120697	Tetraodon nigroviridis	52.92	0.00e+00	646.00
IUUC-Ttr-128276	Tursiops truncatus	98.84	0.00e+00	1273.00
IUUC-Xtr-131778	Xenopus tropicalis	72.03	0.00e+00	892.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence