iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044273

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000843

Gene Name

LOC100800213; GLYMA_10G133700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G26870	GLYMA10G26870.1	GLYMA10G26870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-24	84.8	396	428
E3 activity/RING/U-box	1.70e-16	61.6	2	68
UBD/Beta-Prp	1.60e-44	153.9	222	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH+++vt+++f  ++ +l+++++Dg +k+WDlr+
   Q: 396  GHAGPVTAISFseNGYFLATAAHDG-VKLWDLRK 428
           8**********8665889******7.8****986 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e+++dPvv+  sG  ++++ Ie++++++gk cP+t++plt +d+vP +t + +  + +++ s
   Q: 2    NCSISGEVPEDPVVSRnSGLLFEKRLIERHISDYGK-CPITGEPLTMDDIVPIKTGKIVKPRPVQAAS 68
           7***************9*******************.*********************9998887765 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetlsghdgvv 140
            +++++ ++++  ++++++tg+ D ++ ++d  +g+++ tl+gh+++v+s++f ++g++++++s+d+t+r+w   d  ++ c + +l+ h++ v
   Q: 222  TNKQGIISLDILYSKDLIATGGIDTNAVIFDRPSGQILATLSGHSKKVTSVKFVAQGESFLTASADKTVRLWqgsDDGNYNCRH-ILKDHTAEV 314
           567788888888888899999999999999999999999999999999999999999999999999999997333455666666.999999999 PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
           + v+vh ++n++v++slD+   ++ l++g++l++   t+g  +  +s +f+++g  l +g + + vk+wd++++  v ++ gh  +v+ + fs+
   Q: 315  QAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVydTSGSSEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHAGPVTAISFSE 408
           9999999999999999999999999999999998888666888888888999999999999999999999998888999999999999999998 PP
   S: 233  nderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
           n+ +l+++++Dg +++Wdlr+ ++ ++++   +s ++ + ++f+++  +l+ + s+++i+++++
   Q: 409  NGYFLATAAHDG-VKLWDLRKLKNFRNFAP-YDSETPTSSVEFDHSGSYLAVAGSDIRIYQVAN 470
           888888777554.78999998888888876.557777777788877777777777888888765 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MNCSISGEVP EDPVVSRNSG LLFEKRLIER HISDYGKCPI TGEPLTMDDI VPIKTGKIVK 60
PRPVQAASIP GMLGMFQNEW DGLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGGGGTTA GTTGGTGGGT GGGGGAGTAC TCCTCGCCCC TCTCATGTGT CCCGTTGACA 60
TTCTTTTGTT AAGAACTCGA AATGGAAAAT GGATCGGGCA TATGGGCCGG GCCGTCCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

gmx:100800213

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001230	Ailuropoda melanoleuca	45.05	3.00e-110	392.00
IUUC-Apl-003686	Anas platyrhynchos	42.44	2.00e-82	299.00
IUUC-Aca-005272	Anolis carolinensis	45.19	2.00e-115	409.00
IUUC-Ago-007879	Ashbya gossypii	42.76	4.00e-25	109.00
IUUC-Afu-008957	Aspergillus fumigatus	33.26	4.00e-69	255.00
IUUC-Ang-009746	Aspergillus niger	33.06	9.00e-68	250.00
IUUC-Ate-010412	Aspergillus terreus	34.10	9.00e-64	237.00
IUUC-Bta-013242	Bos taurus	45.96	1.00e-116	413.00
IUUC-Cel-018271	Caenorhabditis elegans	40.62	5.00e-102	364.00
IUUC-Cja-019879	Callithrix jacchus	45.87	5.00e-115	408.00
IUUC-Cfa-020175	Canis familiaris	45.77	2.00e-116	412.00
IUUC-Cpo-022379	Cavia porcellus	45.77	2.00e-116	412.00
IUUC-Csa-023500	Chlorocebus sabaeus	45.77	4.00e-116	411.00
IUUC-Cho-025065	Choloepus hoffmanni	36.39	7.00e-43	167.00
IUUC-Dre-028187	Danio rerio	43.57	2.00e-110	392.00
IUUC-Dno-029453	Dasypus novemcinctus	45.77	4.00e-116	411.00
IUUC-Dor-030150	Dipodomys ordii	43.37	5.00e-41	162.00
IUUC-Dse-031220	Dothistroma septosporum	32.11	2.00e-63	236.00
IUUC-Dme-031906	Drosophila melanogaster	44.25	5.00e-109	388.00
IUUC-Eca-033478	Equus caballus	45.96	2.00e-116	412.00
IUUC-Eeu-034974	Erinaceus europaeus	46.04	3.00e-75	275.00
IUUC-Fca-036194	Felis catus	45.28	7.00e-115	407.00
IUUC-Fal-037417	Ficedula albicollis	45.09	2.00e-116	412.00
IUUC-Fso-038256	Fusarium solani	31.30	3.00e-67	249.00
IUUC-Gmo-038713	Gadus morhua	43.57	4.00e-112	398.00
IUUC-Gga-041143	Gallus gallus	45.66	8.00e-117	414.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.34	2.00e-114	405.00
IUUC-Ggo-045262	Gorilla gorilla	45.77	4.00e-116	411.00
IUUC-Hsa-046036	Homo sapiens	45.77	4.00e-116	411.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	45.00	5.00e-112	397.00
IUUC-Kpa-049195	Komagataella pastoris	43.18	3.00e-19	89.70
IUUC-Lch-050105	Latimeria chalumnae	44.44	3.00e-114	405.00
IUUC-Loc-052042	Lepisosteus oculatus	39.46	4.00e-81	295.00
IUUC-Laf-053451	Loxodonta africana	44.32	9.00e-113	400.00
IUUC-Mcc-055786	Macaca mulatta	45.77	4.00e-116	411.00
IUUC-Meu-056161	Macropus eugenii	43.59	5.00e-48	185.00
IUUC-Mla-059085	Melampsora laricipopulina	36.06	1.00e-77	283.00
IUUC-Mga-060158	Meleagris gallopavo	43.89	7.00e-103	367.00
IUUC-Mvi-060441	Microbotryum violaceum	36.21	2.00e-71	263.00
IUUC-Mmr-061085	Microcebus murinus	45.77	4.00e-116	411.00
IUUC-Mdo-061804	Monodelphis domestica	45.58	8.00e-116	410.00
IUUC-Mmu-063608	Mus musculus	44.16	9.00e-113	400.00
IUUC-Mac-064972	Musa acuminata	76.72	0.00e+00	836.00
IUUC-Mpu-065700	Mustela putorius furo	45.77	1.00e-116	413.00
IUUC-Mlu-068223	Myotis lucifugus	44.11	4.00e-113	401.00
IUUC-Nfi-068504	Neosartorya fischeri	33.61	7.00e-70	258.00
IUUC-Nle-069754	Nomascus leucogenys	45.77	4.00e-116	411.00
IUUC-Opr-070621	Ochotona princeps	45.85	2.00e-107	383.00
IUUC-Ont-071377	Oreochromis niloticus	43.95	1.00e-111	396.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.99	2.00e-112	399.00
IUUC-Ola-086566	Oryzias latipes	43.59	2.00e-112	399.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.71	1.00e-114	406.00
IUUC-Oga-089010	Otolemur garnettii	44.11	2.00e-109	389.00
IUUC-Oar-089638	Ovis aries	45.96	1.00e-116	413.00
IUUC-Ptr-091141	Pan troglodytes	45.77	4.00e-116	411.00
IUUC-Pan-092662	Papio anubis	45.77	4.00e-116	411.00
IUUC-Psi-093777	Pelodiscus sinensis	45.56	9.00e-91	327.00
IUUC-Pfo-096390	Poecilia formosa	44.15	4.00e-112	398.00
IUUC-Pab-098250	Pongo abelii	46.14	4.00e-111	395.00
IUUC-Pca-100553	Procavia capensis	45.77	8.00e-114	404.00
IUUC-Pva-102189	Pteropus vampyrus	45.96	1.00e-116	413.00
IUUC-Ptt-103984	Puccinia triticina	35.05	1.00e-77	284.00
IUUC-Rno-105581	Rattus norvegicus	45.77	3.00e-116	412.00
IUUC-Sha-107071	Sarcophilus harrisii	43.73	6.00e-112	397.00
IUUC-Sre-115134	Sporisorium reilianum	33.45	8.00e-79	287.00
IUUC-Ssc-116260	Sus scrofa	45.96	8.00e-117	414.00
IUUC-Tgu-116533	Taeniopygia guttata	44.89	3.00e-116	412.00
IUUC-Tru-117800	Takifugu rubripes	43.98	8.00e-114	404.00
IUUC-Tsy-118980	Tarsius syrichta	43.53	2.00e-101	362.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.19	3.00e-74	272.00
IUUC-Tre-121920	Trichoderma reesei	32.38	3.00e-60	226.00
IUUC-Tbe-127582	Tupaia belangeri	45.75	3.00e-75	276.00
IUUC-Ttr-128313	Tursiops truncatus	45.96	3.00e-115	408.00
IUUC-Uma-129626	Ustilago maydis	35.47	6.00e-81	294.00
IUUC-Vpa-130593	Vicugna pacos	46.90	2.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence