iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099266

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTR_0012s13650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s13650	POPTR_0012s13650.1	POPTR_0012s13650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-08	34.0	95	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+ ++++g  +++lpC H++h+dC++kw         + +C +C+
   Q: 95   CVICKMEYERGdrLVTLPCAHQYHEDCIKKW------LEDNKNCCVCK 136
           ****999955544999***************......99999999996 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMGQPWHGSY GSYLEDDEAI ARELHQSYNS YVADDAAIAR ELQEMEDSLG TMEMHRFEES 60
MGSVSKGLSR EAVSRLPVHK YSPSSTRSNS GDAECVICKM EYERGDRLVT LPCAHQYHED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGGAC AACCATGGCA TGGAAGCTAT GGTTCGTATT TGGAAGATGA TGAAGCTATA 60
GCTAGAGAAC TGCATCAGAG CTACAATTCA TATGTAGCTG ATGATGCAGC TATAGCTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033276--BB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0046621--P:negative regulation of organ growth
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0012s13650g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-027786	Danio rerio	41.86	1.00e-16	80.50
IUUC-Ola-087372	Oryzias latipes	41.18	5.00e-16	78.20
IUUC-Pfo-096517	Poecilia formosa	42.35	3.00e-16	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence