iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111887

Ensembl Protein ID

Solyc12g005470.1.1

UniProt Accession

K4DB85; K4DB85_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g005470.1	Solyc12g005470.1.1	Solyc12g005470.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.8	519	563

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++ +     ++  +v+pC H+fh  Clq+w         +  CP+Cr
   Q: 519  CVICMTAIdhtqrSNNCMVTPCDHFFHSGCLQRW------MDIKMECPTCR 563
           *****99966666333889***************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGMAKRLYFL RFKRKKYGVL LRVLFSLWFI LEGICPVMGV RPLRERYRSW GDEWLLVRKD 60
ENELGPFSAW NITGTYRGSW RFLDSTNSSS RFPDFRKSNG NSVLELISNP TKITGVHYIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTATGG CAAAAAGATT ATATTTTTTG AGGTTTAAGA GGAAAAAGTA TGGAGTTTTG 60
CTTAGAGTTC TTTTTAGTTT ATGGTTCATC CTTGAAGGGA TTTGCCCAGT AATGGGTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101267382

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003038	Amborella trichopoda	74.42	0.00e+00	773.00
IUUC-Ath-007176	Arabidopsis thaliana	75.78	0.00e+00	847.00
IUUC-Ago-007897	Ashbya gossypii	30.32	8.00e-39	154.00
IUUC-Afu-008993	Aspergillus fumigatus	23.09	1.00e-25	111.00
IUUC-Ate-010380	Aspergillus terreus	26.74	3.00e-24	106.00
IUUC-Bgr-012261	Blumeria graminis	29.27	2.00e-16	80.50
IUUC-Bdi-014178	Brachypodium distachyon	75.48	0.00e+00	777.00
IUUC-Bol-016426	Brassica oleracea	73.36	0.00e+00	843.00
IUUC-Bra-017095	Brassica rapa	75.80	0.00e+00	841.00
IUUC-Cre-022642	Chlamydomonas reinhardtii	42.29	3.00e-37	147.00
IUUC-Cne-027078	Cryptococcus neoformans	34.62	8.00e-14	72.00
IUUC-Cme-027308	Cyanidioschyzon merolae	42.19	5.00e-72	265.00
IUUC-Gma-042652	Glycine max	78.95	0.00e+00	903.00
IUUC-Hvu-047407	Hordeum vulgare	72.34	0.00e+00	726.00
IUUC-Kpa-049246	Komagataella pastoris	33.33	8.00e-26	111.00
IUUC-Lpe-050804	Leersia perrieri	70.58	0.00e+00	723.00
IUUC-Mpo-057296	Magnaporthe poae	26.15	1.00e-17	84.70
IUUC-Mtr-057662	Medicago truncatula	77.21	0.00e+00	900.00
IUUC-Mvi-060396	Microbotryum violaceum	30.73	1.00e-20	94.40
IUUC-Mac-065030	Musa acuminata	75.65	0.00e+00	780.00
IUUC-Oba-075543	Oryza barthii	69.47	0.00e+00	655.00
IUUC-Obr-076427	Oryza brachyantha	75.78	0.00e+00	776.00
IUUC-Ogl-077281	Oryza glaberrima	75.19	0.00e+00	781.00
IUUC-Ogu-078135	Oryza glumaepatula	69.88	0.00e+00	659.00
IUUC-Oin-079565	Oryza indica	72.12	0.00e+00	736.00
IUUC-Olo-080765	Oryza longistaminata	61.72	3.00e-165	573.00
IUUC-Ome-081704	Oryza meridionalis	69.26	0.00e+00	655.00
IUUC-Oni-082520	Oryza nivara	65.27	2.00e-133	468.00
IUUC-Opu-083443	Oryza punctata	61.88	8.00e-162	562.00
IUUC-Oru-085261	Oryza rufipogon	69.67	0.00e+00	657.00
IUUC-Osa-085322	Oryza sativa	76.29	0.00e+00	635.00
IUUC-Olu-087584	Ostreococcus lucimarinus	43.17	4.00e-60	223.00
IUUC-Ppa-095582	Physcomitrella patens	58.52	0.00e+00	664.00
IUUC-Pop-098911	Populus trichocarpa	84.27	0.00e+00	936.00
IUUC-Ppe-102081	Prunus persica	82.91	0.00e+00	950.00
IUUC-Pgr-103658	Puccinia graminis	29.41	4.00e-21	96.30
IUUC-Ptt-103835	Puccinia triticina	40.19	1.00e-15	77.80
IUUC-Pte-104066	Pyrenophora teres	26.35	2.00e-06	48.50
IUUC-Sce-106438	Saccharomyces cerevisiae	28.74	1.00e-37	150.00
IUUC-Sit-109719	Setaria italica	76.45	0.00e+00	762.00
IUUC-Sbi-114347	Sorghum bicolor	76.54	0.00e+00	769.00
IUUC-Sre-114925	Sporisorium reilianum	36.92	2.00e-19	90.50
IUUC-Tca-121160	Theobroma cacao	86.52	0.00e+00	926.00
IUUC-Tvi-122299	Trichoderma virens	27.43	1.00e-19	91.70
IUUC-Tae-125137	Triticum aestivum	74.71	0.00e+00	771.00
IUUC-Tur-126740	Triticum urartu	75.22	3.00e-83	301.00
IUUC-Tme-126915	Tuber melanosporum	30.42	1.00e-41	164.00
IUUC-Uma-129430	Ustilago maydis	34.59	2.00e-18	87.40
IUUC-Vda-129918	Verticillium dahliae	30.14	2.00e-22	100.00
IUUC-Vvi-131478	Vitis vinifera	85.21	0.00e+00	943.00
IUUC-Yli-134449	Yarrowia lipolytica	27.01	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence