iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099514

Ensembl Protein ID

POPTR_0007s11300.1

UniProt Accession

U5G8C1; U5G8C1_POPTR

Genbank Protein ID

ERP58516.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTR_0007s11290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s11300	POPTR_0007s11300.1	POPTR_0007s11300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-06	28.8	247	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
            ++t++a+ +  +llv+ s Dgt++ W +
   Q: 247  QPITSIAWlPAlRLLVTVSKDGTLQTWKT 275
           58*******8889**************86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEWTTVQHLD LRHVARGFHR PLQPHAAAFH PTQTLIAAAI GTYIIEFDAV TGSKLSSIDI 60
GASVLRMAYS PNTSHAVIAM VEDGTIRSCD FDTEQSWVLH SPEKKMEPLS FDTEVHMALT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGCTCTC TCTCCTCTCT CACCATTTAC AAAGTTGTAA TTCAATATTC AGATCTAAGC 60
AGATATAAAA TTTTGAAGTC TAATGATGCT GATACTATTA TAATTATACA AACAGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043321	Glycine max	80.22	0.00e+00	632.00
IUUC-Mtr-058055	Medicago truncatula	75.68	4.00e-172	597.00
IUUC-Mac-065085	Musa acuminata	80.22	0.00e+00	630.00
IUUC-Oan-073438	Ornithorhynchus anatinus	27.78	9.00e-05	42.40
IUUC-Pgr-103384	Puccinia graminis	25.69	1.00e-04	41.60
IUUC-Ptt-103792	Puccinia triticina	26.39	5.00e-05	42.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence